RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 Q8N1Y9 231 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 CHD6Q8TD26 2715 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 RAI1Q7Z5J4 1906 aaPredicted RBP5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 NPIPB6E9PJ23 425 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 SIVA1O15304 175 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 NCR2O95944 276 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 IGHV4-39P01824 125 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 MYOZ3Q8TDC0 251 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 TET2Q6N021 2002 aaPredicted RBP5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 DOPEY2Q9Y3R5 2298 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 A0A1W2PPM0 123 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 IGLV2-23P01705 113 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 CRYGCP07315 174 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 NHP2Q9NX24 153 aaKnown RBP5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 S4R3C0 116 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 POLQO75417 2590 aa5.49□□□□□ -1.53
SRGAP3-213ENST00000618999 SH2D1AO60880 128 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 CNTFRP26992 372 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 LEPP41159 167 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 FOXC2Q99958 501 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 SIRPDQ9H106 197 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 IGHV1-3A0A0C4DH29 117 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 SMKR1H3BMG3 65 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 CEACAM3P40198 252 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 SUMO2P61956 95 aaKnown RBP5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 NXT2Q9NPJ8 142 aaKnown RBP5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 HIF1ANQ9NWT6 349 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 UFC1Q9Y3C8 167 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 NCBP2LA6PVI3 153 aaKnown RBP5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 FSTL3O95633 263 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 SRSF1Q07955 248 aaKnown RBP eCLIP5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 MRPL51Q4U2R6 128 aaKnown RBP5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 PRSS57Q6UWY2 283 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 C2orf91Q6ZV80 131 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 C8orf31Q8N9H6 132 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 ZNF48Q96MX3 618 aaPredicted RBP5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 C8orf49Q96NF6 230 aa5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 USP9YO00507 2555 aaPredicted RBP5.48□□□□□ -1.53
SRGAP3-213ENST00000618999 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 IGKCP01834 107 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 Q6ZS46 218 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 C17orf77Q96MU5 243 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 HIST1H4GQ99525 98 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 NAV2Q8IVL1 2488 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 HRNRQ86YZ3 2850 aaPredicted RBP5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 IGKV2-40A0A087WW87 121 aaPredicted RBP5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 OVOL3O00110 214 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 ATP5LO75964 103 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 DPM2O94777 84 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 IGKV2D-40P01614 121 aaPredicted RBP5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 DLX6P56179 175 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 KLRD1Q13241 179 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 PDE6HQ13956 83 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 RITA1Q96K30 269 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 MAP1AP78559 2803 aaPredicted RBP5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 DCHS2Q6V1P9 2916 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 TRBV6-1A0A0K0K1D8 114 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 H3BRN7 92 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 J3QKU1 62 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 ABCA12Q86UK0 2595 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 PCP2Q8IVA1 136 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 TTC9CQ8N5M4 171 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 SIGMAR1Q99720 223 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 CHAC1Q9BUX1 264 aa5.47□□□□□ -1.53
SRGAP3-213ENST00000618999 A8MZ25 164 aa5.46□□□□□ -1.53
SRGAP3-213ENST00000618999 NPYP01303 97 aa5.46□□□□□ -1.53
SRGAP3-213ENST00000618999 SMIM17P0DL12 118 aa5.46□□□□□ -1.53
SRGAP3-213ENST00000618999 ZFP36P26651 326 aaKnown RBP5.46□□□□□ -1.53
SRGAP3-213ENST00000618999 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.53
SRGAP3-213ENST00000618999 NAV3Q8IVL0 2385 aa5.46□□□□□ -1.53
SRGAP3-213ENST00000618999 TANC2Q9HCD6 1990 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 G3V4G9 280 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 FAM106CPP0CH98 169 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 LOXL1Q08397 574 aaPredicted RBP5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 FAM106AQ4KMX7 169 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 GTSCR1Q86UQ5 136 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 DKK2Q9UBU2 259 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 SMPXQ9UHP9 88 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 FABP5P3A8MUU1 101 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 BUB1B-PAK6H3BSN5 160 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 IGKV1-17P01599 117 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 EVI2AP22794 236 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 SMAGPQ0VAQ4 97 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 Q8TAT8 98 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 ZNF479Q96JC4 524 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 C21orf62Q9NYP8 219 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 DSCAML1Q8TD84 2053 aa5.46□□□□□ -1.54
SRGAP3-213ENST00000618999 PRTN3P24158 256 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 ZC2HC1BQ5TFG8 222 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 SPANXN1Q5VSR9 72 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 ZNF493Q6ZR52 646 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 PRR25Q96S07 402 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 NPFFR1Q9GZQ6 430 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 GTSF1LQ9H1H1 148 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 DPM3Q9P2X0 92 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV4-61A0A0C4DH41 118 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 M0R1W7 72 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 NBR2O15453 112 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms