RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 LGALS9CQ6DKI2 356 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 SFTA2Q6UW10 78 aa10.92□□□□□ -0.66
CNOT3-210ENST00000618939 TNRC6AQ8NDV7 1962 aaKnown RBP10.92□□□□□ -0.66
CNOT3-210ENST00000618939 ZNF418Q8TF45 676 aaPredicted RBP10.92□□□□□ -0.66
CNOT3-210ENST00000618939 COX8AP10176 69 aa10.91□□□□□ -0.66
CNOT3-210ENST00000618939 SUMO2P61956 95 aaKnown RBP10.91□□□□□ -0.66
CNOT3-210ENST00000618939 Q8N8P6 123 aa10.91□□□□□ -0.66
CNOT3-210ENST00000618939 ZNF747Q9BV97 191 aa10.91□□□□□ -0.66
CNOT3-210ENST00000618939 MEGF9Q9H1U4 602 aa10.91□□□□□ -0.66
CNOT3-210ENST00000618939 IGHV7-81A0A0B4J1V7 117 aa10.91□□□□□ -0.66
CNOT3-210ENST00000618939 DYNAPQ8N1N2 210 aa10.91□□□□□ -0.66
CNOT3-210ENST00000618939 IGLV2-8P01709 118 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 SPOCK3Q9BQ16 436 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 KIAA1549Q9HCM3 1950 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 TMEM8BA6NDV4 472 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 VCYO14598 125 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 MEIG1Q5JSS6 88 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 BPTFQ12830 3046 aa10.9□□□□□ -0.66
CNOT3-210ENST00000618939 HOXA3O43365 443 aaPredicted RBP10.9□□□□□ -0.67
CNOT3-210ENST00000618939 DTX2Q86UW9 622 aa10.9□□□□□ -0.67
CNOT3-210ENST00000618939 CHAC1Q9BUX1 264 aa10.9□□□□□ -0.67
CNOT3-210ENST00000618939 NDUFA4O00483 81 aa10.89□□□□□ -0.67
CNOT3-210ENST00000618939 CTSGP08311 255 aa10.89□□□□□ -0.67
CNOT3-210ENST00000618939 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
CNOT3-210ENST00000618939 Q8N7P7 452 aa10.89□□□□□ -0.67
CNOT3-210ENST00000618939 LINC00173Q6ZV60 143 aa10.89□□□□□ -0.67
CNOT3-210ENST00000618939 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
CNOT3-210ENST00000618939 NAV3Q8IVL0 2385 aa10.89□□□□□ -0.67
CNOT3-210ENST00000618939 A0A087WWL8 130 aa10.88□□□□□ -0.67
CNOT3-210ENST00000618939 GAGE1Q13065 139 aa10.88□□□□□ -0.67
CNOT3-210ENST00000618939 CSPG4Q6UVK1 2322 aa10.88□□□□□ -0.67
CNOT3-210ENST00000618939 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
CNOT3-210ENST00000618939 CHD7Q9P2D1 2997 aa10.88□□□□□ -0.67
CNOT3-210ENST00000618939 TRAV26-2A0A0B4J265 109 aa10.88□□□□□ -0.67
CNOT3-210ENST00000618939 CENPVL3A0A0U1RRI6 287 aa10.88□□□□□ -0.67
CNOT3-210ENST00000618939 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
CNOT3-210ENST00000618939 CD28P10747 220 aa10.87□□□□□ -0.67
CNOT3-210ENST00000618939 ADORA2A-AS1P86434 159 aa10.87□□□□□ -0.67
CNOT3-210ENST00000618939 GAGE12BA1L429 117 aa10.87□□□□□ -0.67
CNOT3-210ENST00000618939 SLC25A16P16260 332 aa10.87□□□□□ -0.67
CNOT3-210ENST00000618939 ZNF876PQ49A33 203 aa10.87□□□□□ -0.67
CNOT3-210ENST00000618939 SYNJ2BPP57105 145 aa10.87□□□□□ -0.67
CNOT3-210ENST00000618939 WI2-2373I1.2A0A1W2PRP0 233 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 C19orf71A6NCJ1 209 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 H3BRM9 83 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 ANXA2RQ3ZCQ2 193 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 FBXL19-AS1Q494R0 122 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 C2orf66Q6UXQ4 117 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 Q8N9W7 124 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 BVES-AS1Q5T3Y7 98 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 COPS9Q8WXC6 57 aa10.86□□□□□ -0.67
CNOT3-210ENST00000618939 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
CNOT3-210ENST00000618939 STHQ8IWL8 128 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 C11orf44Q8N8P7 122 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 LINC01356Q8N9X3 169 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 IGHV3-64A0A075B6Q5 118 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 TRAV2A0A0B4J234 112 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 GATA3P23771 443 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 SMIM2Q9BVW6 85 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 EMP1P54849 157 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 CFHR4Q92496 578 aa10.85□□□□□ -0.67
CNOT3-210ENST00000618939 NCOR2Q9Y618 2525 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 IGHV3-73A0A0B4J1V6 119 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 LCNL1Q6ZST4 164 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 BUB3O43684 328 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 FOXE3Q13461 319 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 LINC00322Q6ZN03 302 aaPredicted RBP10.84□□□□□ -0.67
CNOT3-210ENST00000618939 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 MRPL35Q9NZE8 188 aaKnown RBP10.84□□□□□ -0.67
CNOT3-210ENST00000618939 DKK2Q9UBU2 259 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 Q6ZVH6 145 aa10.84□□□□□ -0.67
CNOT3-210ENST00000618939 A0A1B0GXF2 115 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 GAGE13Q4V321 117 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 MRPL53Q96EL3 112 aaKnown RBP10.83□□□□□ -0.68
CNOT3-210ENST00000618939 MSRB1Q9NZV6 116 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 RIPPLY3P57055 190 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 TMEM101Q96IK0 257 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 CEP295Q9C0D2 2601 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 TRGV2A0A075B6R0 118 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 ZFP36P26651 326 aaKnown RBP10.83□□□□□ -0.68
CNOT3-210ENST00000618939 MBD6Q96DN6 1003 aa10.83□□□□□ -0.68
CNOT3-210ENST00000618939 MLST8Q9BVC4 326 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 TRBV6-1A0A0K0K1D8 114 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 LINC01545Q5VT33 79 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 IGKV3D-20A0A0C4DH25 116 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 GATA1P15976 413 aaPredicted RBP10.82□□□□□ -0.68
CNOT3-210ENST00000618939 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 GDF5OSQ5U4N7 250 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 MAPK1IP1LQ8NDC0 245 aa10.82□□□□□ -0.68
CNOT3-210ENST00000618939 IGHV7-4-1A0A0J9YVY3 117 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 PF4P02776 101 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 TP53TG3Q9ULZ0 132 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 LENEPQ9Y5L5 61 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 C9orf118A6NHY6 69 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 F6UB75 175 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 DEFB131AP59861 70 aa10.81□□□□□ -0.68
CNOT3-210ENST00000618939 ZNF415Q09FC8 603 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms