RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
CIITA-213ENST00000618327 TMEM14CQ9P0S9 112 aa10.95□□□□□ -0.66
CIITA-213ENST00000618327 ATXN8Q156A1 80 aa10.95□□□□□ -0.66
CIITA-213ENST00000618327 ZNF843Q8N446 348 aa10.95□□□□□ -0.66
CIITA-213ENST00000618327 SH2D1AO60880 128 aa10.95□□□□□ -0.66
CIITA-213ENST00000618327 GHRHP01286 108 aa10.95□□□□□ -0.66
CIITA-213ENST00000618327 Q8N9W7 124 aa10.95□□□□□ -0.66
CIITA-213ENST00000618327 H3BUA1 57 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 LY6G5BQ8NDX9 201 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 MRPL27Q9P0M9 148 aaKnown RBP10.94□□□□□ -0.66
CIITA-213ENST00000618327 SYS1-DBNDD2H3BUS1 97 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 ELANEP08246 267 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 OCIAD2Q56VL3 154 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 Q71RC1 249 aaPredicted RBP10.94□□□□□ -0.66
CIITA-213ENST00000618327 A0A0U1RRA0 63 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 CD5LO43866 347 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 ESDP10768 282 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
CIITA-213ENST00000618327 CDSNQ15517 529 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 LYPD6BQ8NI32 183 aa10.94□□□□□ -0.66
CIITA-213ENST00000618327 D6R8Y8 96 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 LINC01619G3V211 115 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 ERCC8Q13216 396 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 FXYD5Q96DB9 178 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 NCR2O95944 276 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 BLCAPP62952 87 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 NUP35Q8NFH5 326 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 I3L2K1 104 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 K7EIM0 57 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 P0C879 139 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 KIR3DS1Q14943 382 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 RNF114Q9Y508 228 aa10.93□□□□□ -0.66
CIITA-213ENST00000618327 TRGV11A0A075B6L2 103 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 E7EUB6 86 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 DLX4Q92988 240 aaPredicted RBP10.92□□□□□ -0.66
CIITA-213ENST00000618327 COX11Q9Y6N1 276 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 MYO18BQ8IUG5 2567 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 M0R2P5 195 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 TMEM75Q8N9X5 138 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 C20orf144Q9BQM9 153 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 ZC2HC1BQ5TFG8 222 aa10.92□□□□□ -0.66
CIITA-213ENST00000618327 IGLV11-55A0A075B6I3 123 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 SLC25A20O43772 301 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 PRR31Q5SQ13 230 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 LAGE3Q14657 143 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 TEX22C9J3V5 150 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 CD28P10747 220 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 CFAP161Q6P656 301 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 C8orf86Q6ZUL3 223 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 C5orf56Q8N8D9 126 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 SNHG12Q9BXW3 62 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 WNK1Q9H4A3 2382 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 HIVEP3Q5T1R4 2406 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 TRGV2A0A075B6R0 118 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
CIITA-213ENST00000618327 DPH3Q96FX2 82 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 C11orf1Q9H5F2 150 aa10.91□□□□□ -0.66
CIITA-213ENST00000618327 IGKV1-17P01599 117 aa10.9□□□□□ -0.66
CIITA-213ENST00000618327 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
CIITA-213ENST00000618327 C10orf91Q5T1B1 145 aa10.9□□□□□ -0.66
CIITA-213ENST00000618327 C1orf229Q6ZS94 237 aaPredicted RBP10.9□□□□□ -0.66
CIITA-213ENST00000618327 IGHV3-64A0A075B6Q5 118 aa10.9□□□□□ -0.66
CIITA-213ENST00000618327 C11orf52Q96A22 123 aa10.9□□□□□ -0.66
CIITA-213ENST00000618327 NAV3Q8IVL0 2385 aa10.9□□□□□ -0.66
CIITA-213ENST00000618327 TRANK1O15050 2925 aa10.9□□□□□ -0.67
CIITA-213ENST00000618327 DEFB131AP59861 70 aa10.89□□□□□ -0.67
CIITA-213ENST00000618327 ODF3BA8MYP8 253 aa10.89□□□□□ -0.67
CIITA-213ENST00000618327 SPINK8P0C7L1 97 aa10.89□□□□□ -0.67
CIITA-213ENST00000618327 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
CIITA-213ENST00000618327 POLR3KQ9Y2Y1 108 aaPredicted RBP10.89□□□□□ -0.67
CIITA-213ENST00000618327 FXYD7P58549 80 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 TCTEX1D4Q5JR98 221 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 EIF4EBP1Q13541 118 aaPredicted RBP10.88□□□□□ -0.67
CIITA-213ENST00000618327 CST9LQ9H4G1 147 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 MCRIP2Q9BUT9 160 aaKnown RBP10.88□□□□□ -0.67
CIITA-213ENST00000618327 KMT2EQ8IZD2 1858 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 CPAMD8Q8IZJ3 1885 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 CRYGCP07315 174 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 PFN1P07737 140 aaKnown RBP10.88□□□□□ -0.67
CIITA-213ENST00000618327 C2orf82Q6UX34 121 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 ADAMTS20P59510 1910 aa10.88□□□□□ -0.67
CIITA-213ENST00000618327 IGHV7-4-1A0A0J9YVY3 117 aa10.87□□□□□ -0.67
CIITA-213ENST00000618327 SONP18583 2426 aaKnown RBP10.87□□□□□ -0.67
CIITA-213ENST00000618327 LOXL1Q08397 574 aaPredicted RBP10.87□□□□□ -0.67
CIITA-213ENST00000618327 ADAMTSL5Q6ZMM2 481 aa10.87□□□□□ -0.67
CIITA-213ENST00000618327 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
CIITA-213ENST00000618327 Q0VG73 95 aa10.87□□□□□ -0.67
CIITA-213ENST00000618327 CTSGP08311 255 aa10.87□□□□□ -0.67
CIITA-213ENST00000618327 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
CIITA-213ENST00000618327 IGKV1OR2-108A0A075B7D4 117 aa10.86□□□□□ -0.67
CIITA-213ENST00000618327 CRPP02741 224 aa10.86□□□□□ -0.67
CIITA-213ENST00000618327 C17orf77Q96MU5 243 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms