RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 SMIM9A6NGZ8 99 aa11.5□□□□□ -0.57
MALAT1-213ENST00000618227 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
MALAT1-213ENST00000618227 GFI1BQ5VTD9 330 aa11.5□□□□□ -0.57
MALAT1-213ENST00000618227 Q6AWC8 147 aa11.5□□□□□ -0.57
MALAT1-213ENST00000618227 OVOL2Q9BRP0 275 aa11.5□□□□□ -0.57
MALAT1-213ENST00000618227 LINC00467Q9BRT7 94 aa11.5□□□□□ -0.57
MALAT1-213ENST00000618227 H7BYZ3 331 aa11.49□□□□□ -0.57
MALAT1-213ENST00000618227 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
MALAT1-213ENST00000618227 RPL35P42766 123 aaKnown RBP11.49□□□□□ -0.57
MALAT1-213ENST00000618227 FXYD7P58549 80 aa11.49□□□□□ -0.57
MALAT1-213ENST00000618227 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
MALAT1-213ENST00000618227 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
MALAT1-213ENST00000618227 C1orf158Q8N1D5 194 aa11.49□□□□□ -0.57
MALAT1-213ENST00000618227 SRP19P09132 144 aaKnown RBP11.48□□□□□ -0.57
MALAT1-213ENST00000618227 DEFB135Q30KP9 77 aa11.48□□□□□ -0.57
MALAT1-213ENST00000618227 BAGE2Q86Y30 109 aa11.48□□□□□ -0.57
MALAT1-213ENST00000618227 SGK494Q96LW2 274 aa11.48□□□□□ -0.57
MALAT1-213ENST00000618227 ASCL2Q99929 193 aa11.48□□□□□ -0.57
MALAT1-213ENST00000618227 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
MALAT1-213ENST00000618227 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
MALAT1-213ENST00000618227 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
MALAT1-213ENST00000618227 TRAV21A0A0B4J279 112 aa11.47□□□□□ -0.57
MALAT1-213ENST00000618227 LINC00862A6NCI5 91 aa11.47□□□□□ -0.57
MALAT1-213ENST00000618227 C9JCJ5 164 aa11.47□□□□□ -0.57
MALAT1-213ENST00000618227 RNASE4P34096 147 aaKnown RBP11.47□□□□□ -0.57
MALAT1-213ENST00000618227 FAM74A3Q4VXF1 159 aa11.47□□□□□ -0.57
MALAT1-213ENST00000618227 UQCC3Q6UW78 93 aa11.47□□□□□ -0.57
MALAT1-213ENST00000618227 PYGO2Q9BRQ0 406 aa11.47□□□□□ -0.57
MALAT1-213ENST00000618227 MIFP14174 115 aa11.46□□□□□ -0.57
MALAT1-213ENST00000618227 KIR3DS1Q14943 382 aa11.46□□□□□ -0.57
MALAT1-213ENST00000618227 EIF4E3Q8N5X7 224 aaKnown RBP11.46□□□□□ -0.57
MALAT1-213ENST00000618227 OR11H2Q8NH07 326 aa11.46□□□□□ -0.57
MALAT1-213ENST00000618227 DERL1Q9BUN8 251 aa11.46□□□□□ -0.57
MALAT1-213ENST00000618227 BIN3Q9NQY0 253 aa11.46□□□□□ -0.57
MALAT1-213ENST00000618227 LY96Q9Y6Y9 160 aa11.46□□□□□ -0.57
MALAT1-213ENST00000618227 TRAV12-3A0A0B4J271 114 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 PFN1P07737 140 aaKnown RBP11.45□□□□□ -0.58
MALAT1-213ENST00000618227 GNG4P50150 75 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 BTN1A1Q13410 526 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 PRR9Q5T870 116 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 C8orf49Q96NF6 230 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 LINC01587Q99440 93 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 TMEM208Q9BTX3 173 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 PARLQ9H300 379 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 X6R8D5 127 aa11.45□□□□□ -0.58
MALAT1-213ENST00000618227 GCGP01275 180 aa11.44□□□□□ -0.58
MALAT1-213ENST00000618227 RBMY1A1P0DJD3 496 aaKnown RBP11.44□□□□□ -0.58
MALAT1-213ENST00000618227 RBMY1CP0DJD4 496 aa11.44□□□□□ -0.58
MALAT1-213ENST00000618227 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
MALAT1-213ENST00000618227 RBMY1FQ15415 496 aaKnown RBP11.44□□□□□ -0.58
MALAT1-213ENST00000618227 ZNF674Q2M3X9 581 aa11.44□□□□□ -0.58
MALAT1-213ENST00000618227 TDRG1Q3Y452 100 aa11.44□□□□□ -0.58
MALAT1-213ENST00000618227 CENPWQ5EE01 88 aa11.44□□□□□ -0.58
MALAT1-213ENST00000618227 ZNF493Q6ZR52 646 aa11.44□□□□□ -0.58
MALAT1-213ENST00000618227 TRBV20OR9-2A0A075B6H5 130 aa11.43□□□□□ -0.58
MALAT1-213ENST00000618227 TMEM189A5PLL7 270 aa11.43□□□□□ -0.58
MALAT1-213ENST00000618227 C9JQL5 133 aa11.43□□□□□ -0.58
MALAT1-213ENST00000618227 J3KRW8 73 aa11.43□□□□□ -0.58
MALAT1-213ENST00000618227 IGLV2-8P01709 118 aa11.43□□□□□ -0.58
MALAT1-213ENST00000618227 ANXA2RQ3ZCQ2 193 aa11.43□□□□□ -0.58
MALAT1-213ENST00000618227 FAM162BQ5T6X4 162 aa11.43□□□□□ -0.58
MALAT1-213ENST00000618227 IGHV1OR15-1A0A075B7D0 117 aa11.42□□□□□ -0.58
MALAT1-213ENST00000618227 ZNF80P51504 273 aaPredicted RBP11.42□□□□□ -0.58
MALAT1-213ENST00000618227 RRN3P1Q2M238 152 aa11.42□□□□□ -0.58
MALAT1-213ENST00000618227 ZC2HC1AQ96GY0 325 aa11.42□□□□□ -0.58
MALAT1-213ENST00000618227 KCNS1Q96KK3 526 aa11.42□□□□□ -0.58
MALAT1-213ENST00000618227 SMIM7Q9BQ49 75 aa11.42□□□□□ -0.58
MALAT1-213ENST00000618227 TP53TG3Q9ULZ0 132 aa11.42□□□□□ -0.58
MALAT1-213ENST00000618227 ZNF727A8MUV8 499 aa11.41□□□□□ -0.58
MALAT1-213ENST00000618227 CRIP1P50238 77 aa11.41□□□□□ -0.58
MALAT1-213ENST00000618227 SOHLH1Q5JUK2 328 aa11.41□□□□□ -0.58
MALAT1-213ENST00000618227 FAM159AQ6UWV7 190 aa11.41□□□□□ -0.58
MALAT1-213ENST00000618227 Q8NAQ8 132 aa11.41□□□□□ -0.58
MALAT1-213ENST00000618227 C11orf68Q9H3H3 251 aaKnown RBP11.41□□□□□ -0.58
MALAT1-213ENST00000618227 RETNQ9HD89 108 aa11.41□□□□□ -0.58
MALAT1-213ENST00000618227 IGHV3OR16-12A0A075B7B8 117 aa11.4□□□□□ -0.58
MALAT1-213ENST00000618227 IBA57Q5T440 356 aaKnown RBP11.4□□□□□ -0.58
MALAT1-213ENST00000618227 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
MALAT1-213ENST00000618227 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
MALAT1-213ENST00000618227 U3KQK5 164 aa11.4□□□□□ -0.58
MALAT1-213ENST00000618227 CEBPGP53567 150 aa11.39□□□□□ -0.59
MALAT1-213ENST00000618227 TMEM241Q24JQ0 296 aa11.39□□□□□ -0.59
MALAT1-213ENST00000618227 COMMD7Q86VX2 200 aa11.39□□□□□ -0.59
MALAT1-213ENST00000618227 OCC1Q8TAD7 63 aa11.39□□□□□ -0.59
MALAT1-213ENST00000618227 TRGV11A0A075B6L2 103 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 IGHV4-28A0A0C4DH34 117 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 ZNF705GA8MUZ8 300 aaPredicted RBP11.38□□□□□ -0.59
MALAT1-213ENST00000618227 SH2D1AO60880 128 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 DNLZQ5SXM8 178 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 NHLRC2Q8NBF2 726 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 RNASE8Q8TDE3 154 aaKnown RBP11.38□□□□□ -0.59
MALAT1-213ENST00000618227 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 NAT8Q9UHE5 227 aa11.38□□□□□ -0.59
MALAT1-213ENST00000618227 PRKDCP78527 4128 aaKnown RBP11.37□□□□□ -0.59
MALAT1-213ENST00000618227 TEX48A0A1B0GUV7 120 aa11.37□□□□□ -0.59
MALAT1-213ENST00000618227 C19orf71A6NCJ1 209 aa11.37□□□□□ -0.59
MALAT1-213ENST00000618227 CBY3A6NI87 242 aa11.37□□□□□ -0.59
MALAT1-213ENST00000618227 CXCL1P09341 107 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms