RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 IGHG4P01861 327 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 C11orf53Q8IXP5 236 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
POLR2A-209ENST00000617998 ARMS2P0C7Q2 107 aa8.5□□□□□ -1.05
POLR2A-209ENST00000617998 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
POLR2A-209ENST00000617998 PIEZO2Q9H5I5 2752 aa8.5□□□□□ -1.05
POLR2A-209ENST00000617998 C7orf77A4D0Y5 90 aa8.5□□□□□ -1.05
POLR2A-209ENST00000617998 SH2D1AO60880 128 aa8.5□□□□□ -1.05
POLR2A-209ENST00000617998 ZNF134P52741 427 aa8.5□□□□□ -1.05
POLR2A-209ENST00000617998 WDR83OSQ9Y284 106 aa8.5□□□□□ -1.05
POLR2A-209ENST00000617998 JOSD1Q15040 202 aaPredicted RBP8.5□□□□□ -1.05
POLR2A-209ENST00000617998 F6UB75 175 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 K7EMT4 169 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 MIFP14174 115 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 BUB3O43684 328 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 HIST2H2BDQ6DRA6 164 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 SMIM12Q96EX1 92 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 ZNF581Q9P0T4 197 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 LAIR2Q6ISS4 152 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 LEPROTL1O95214 131 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 FAM3BP58499 235 aaPredicted RBP8.49□□□□□ -1.05
POLR2A-209ENST00000617998 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
POLR2A-209ENST00000617998 PPBPP02775 128 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
POLR2A-209ENST00000617998 PARLQ9H300 379 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 LINC01549A6NIU2 74 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 UBE2AP49459 152 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 SFRP2Q96HF1 295 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 HIST1H4GQ99525 98 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 TCRAP04437 139 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 TMEM218A2RU14 115 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 SMIM9A6NGZ8 99 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 C22orf34Q6ZV56 151 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 SPATA3Q8NHX4 192 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 IL36BQ9NZH7 164 aa8.48□□□□□ -1.05
POLR2A-209ENST00000617998 ZNF345Q14585 488 aa8.47□□□□□ -1.05
POLR2A-209ENST00000617998 CRYGDP07320 174 aa8.47□□□□□ -1.05
POLR2A-209ENST00000617998 CAMK2N2Q96S95 79 aa8.47□□□□□ -1.05
POLR2A-209ENST00000617998 IGHV3-64A0A075B6Q5 118 aa8.47□□□□□ -1.05
POLR2A-209ENST00000617998 ARTNQ5T4W7 220 aa8.47□□□□□ -1.05
POLR2A-209ENST00000617998 ANAPC10Q9UM13 185 aa8.47□□□□□ -1.05
POLR2A-209ENST00000617998 OBSL1O75147 1896 aa8.47□□□□□ -1.05
POLR2A-209ENST00000617998 CXCL3P19876 107 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 GUSBP1Q15486 140 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 ZNF524Q96C55 264 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 ZNF702PQ9H963 129 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 HIGD1CA8MV81 97 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 NDUFA3O95167 84 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 AMTNQ6UX39 209 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 FAM24BQ8N5W8 94 aa8.46□□□□□ -1.05
POLR2A-209ENST00000617998 UBE2D1P51668 147 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 Q6ZS49 121 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 TSKUQ8WUA8 353 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 A0A0J9YWU9 116 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
POLR2A-209ENST00000617998 WT1-ASQ06250 92 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 FAM222AQ5U5X8 452 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 MGST2Q99735 147 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 DMRT1Q9Y5R6 373 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 WNK1Q9H4A3 2382 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 XCL1P47992 114 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
POLR2A-209ENST00000617998 TRAV26-1A0A087WT03 109 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 J3QR89 54 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 MAP6D1Q9H9H5 199 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 IGHV4-30-4P0DP06 118 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 ADMP35318 185 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 PROP1O75360 226 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 KRTAP24-1Q3LI83 254 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 KIAA1644Q3SXP7 199 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
POLR2A-209ENST00000617998 CIDEAO60543 219 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 ZNF414Q96IQ9 312 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
POLR2A-209ENST00000617998 PRO0255Q9UI72 69 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 IGLV10-54A0A075B6I4 117 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 Q0VG73 95 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 DEFB114Q30KQ6 69 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 SHANK1Q9Y566 2161 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 ID3Q02535 119 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 MSMPQ1L6U9 139 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 FRMD6-AS1P0C7T7 363 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 LYPD6Q86Y78 171 aa8.44□□□□□ -1.06
POLR2A-209ENST00000617998 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 SCGB1A1P11684 91 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 KLK12Q9UKR0 248 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 TAL2Q16559 108 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 CLLU1Q5K131 121 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 LYZL1Q6UWQ5 148 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 TIMM17AQ99595 171 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 SORL1Q92673 2214 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
POLR2A-209ENST00000617998 H3BRN7 92 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 I3L3M4 83 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 CCL20P78556 96 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
POLR2A-209ENST00000617998 FNDC10F2Z333 226 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms