RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 DCANP1Q8TF63 244 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 ZC2HC1AQ96GY0 325 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 DUX3Q96PT4 197 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 VGLL1Q99990 258 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 TGP01266 2768 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 VWFP04275 2813 aa12.64□□□□□ -0.39
TRAPPC3-210ENST00000617904 TMEM189A5PLL7 270 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 IZUMO1RA6ND01 250 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 TYMSP04818 313 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 S100A8P05109 93 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 CSN3P07498 182 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 OR2K2Q8NGT1 345 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
TRAPPC3-210ENST00000617904 MT-ND6P03923 174 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 S100A6P06703 90 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 CXCL1P09341 107 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 TSPOP30536 169 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 ERCC8Q13216 396 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 LEPP41159 167 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 Q8TAT8 98 aa12.62□□□□□ -0.39
TRAPPC3-210ENST00000617904 SH2D1AO60880 128 aa12.61□□□□□ -0.39
TRAPPC3-210ENST00000617904 DEFB114Q30KQ6 69 aa12.61□□□□□ -0.39
TRAPPC3-210ENST00000617904 C20orf173Q96LM9 149 aa12.61□□□□□ -0.39
TRAPPC3-210ENST00000617904 C8orf49Q96NF6 230 aa12.61□□□□□ -0.39
TRAPPC3-210ENST00000617904 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
TRAPPC3-210ENST00000617904 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
TRAPPC3-210ENST00000617904 A0A1B0GW15 77 aa12.6□□□□□ -0.39
TRAPPC3-210ENST00000617904 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
TRAPPC3-210ENST00000617904 TRAPPC1Q9Y5R8 145 aa12.6□□□□□ -0.39
TRAPPC3-210ENST00000617904 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 HIGD1CA8MV81 97 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 SAP30O75446 220 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 ORM1P02763 201 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 GPX1P07203 203 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 EDN2P20800 178 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 TCL1AP56279 114 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 NEU1Q99519 415 aa12.59□□□□□ -0.39
TRAPPC3-210ENST00000617904 HLA-DQA1P01909 254 aa12.58□□□□□ -0.4
TRAPPC3-210ENST00000617904 RIGQ13278 110 aa12.58□□□□□ -0.4
TRAPPC3-210ENST00000617904 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
TRAPPC3-210ENST00000617904 FRZBQ92765 325 aa12.58□□□□□ -0.4
TRAPPC3-210ENST00000617904 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
TRAPPC3-210ENST00000617904 RAB4BP61018 213 aa12.57□□□□□ -0.4
TRAPPC3-210ENST00000617904 A0A0J9YX75 114 aa12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 CRISP2P16562 243 aa12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 INSL3P51460 131 aa12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 FOXA3P55318 350 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 CD300EQ496F6 205 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 ADAMTSL5Q6ZMM2 481 aa12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 LINC00322Q6ZN03 302 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 NUP35Q8NFH5 326 aa12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 GPR61Q9BZJ8 451 aa12.56□□□□□ -0.4
TRAPPC3-210ENST00000617904 F2Z2F3 143 aa12.55□□□□□ -0.4
TRAPPC3-210ENST00000617904 CA1P00915 261 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC3-210ENST00000617904 TRGC2P03986 189 aa12.55□□□□□ -0.4
TRAPPC3-210ENST00000617904 HBBP68871 147 aa12.55□□□□□ -0.4
TRAPPC3-210ENST00000617904 A0A1B0GUT8 65 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 CRIP1P50238 77 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 DEFB131AP59861 70 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 LINC01559Q495D7 138 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 MRPL54Q6P161 138 aaKnown RBP12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 MCRIP2Q9BUT9 160 aaKnown RBP12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 SELENOKQ9Y6D0 94 aa12.54□□□□□ -0.4
TRAPPC3-210ENST00000617904 ADARB2-AS1A8MUL3 147 aa12.53□□□□□ -0.4
TRAPPC3-210ENST00000617904 AMBPP02760 352 aa12.53□□□□□ -0.4
TRAPPC3-210ENST00000617904 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC3-210ENST00000617904 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC3-210ENST00000617904 ACTL10Q5JWF8 245 aa12.53□□□□□ -0.4
TRAPPC3-210ENST00000617904 FER1L6-AS1Q8NA97 138 aa12.53□□□□□ -0.4
TRAPPC3-210ENST00000617904 OR11H12B2RN74 326 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 F6UB75 175 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 SPINK4O60575 86 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 PRB4P10163 310 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 FABP9Q0Z7S8 132 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 FAM19A4Q96LR4 140 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 TPPP3Q9BW30 176 aa12.52□□□□□ -0.41
TRAPPC3-210ENST00000617904 TMSB15BA0A087X1C1 80 aa12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 CDKN1BP46527 198 aa12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 NUTF2P61970 127 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
TRAPPC3-210ENST00000617904 C7orf71A4D174 169 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms