RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 IGHV4-4A0A075B6R2 117 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 NTN5Q8WTR8 489 aaPredicted RBP2.63□□□□□ -1.99
LPP-220ENST00000617246 LTAP01374 205 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 LAMTOR2Q9Y2Q5 125 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 DNLZQ5SXM8 178 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 ZNF833PQ6ZTB9 187 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 PRIMA1Q86XR5 153 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 PLEKHB2Q96CS7 222 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 SNHG12Q9BXW3 62 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 C9orf170A2RU37 121 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 GAGE2BQ13066 116 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 NPDC1Q9NQX5 325 aaPredicted RBP2.62□□□□□ -1.99
LPP-220ENST00000617246 HBDP02042 147 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 ZC2HC1BQ5TFG8 222 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 FAM186AA6NE01 2351 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 ZNF491Q8N8L2 437 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 ORAOV1Q8WV07 137 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 CHCHD7Q9BUK0 85 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.62□□□□□ -1.99
LPP-220ENST00000617246 NCR2O95944 276 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 FSTL3O95633 263 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 IGKV1-5P01602 117 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 COQ2Q96H96 371 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 YPEL3P61236 119 aaPredicted RBP2.62□□□□□ -1.99
LPP-220ENST00000617246 EWSR1Q01844 656 aaKnown RBP eCLIP2.62□□□□□ -1.99
LPP-220ENST00000617246 Q6ZSN1 163 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 MRPL55Q7Z7F7 128 aaKnown RBP2.62□□□□□ -1.99
LPP-220ENST00000617246 TMEM75Q8N9X5 138 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 ZNRF2Q8NHG8 242 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 U3KQA8 63 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 ZNF407Q9C0G0 2248 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 COX6B2Q6YFQ2 88 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 PPP1R1CQ8WVI7 109 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 LINC00846Q9NV44 126 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 KLK9Q9UKQ9 250 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 CHTOPQ9Y3Y2 248 aaKnown RBP2.62□□□□□ -1.99
LPP-220ENST00000617246 FNDC10F2Z333 226 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 IGFBP6P24592 240 aaPredicted RBP2.62□□□□□ -1.99
LPP-220ENST00000617246 C11orf87Q6NUJ2 197 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 CITED1Q99966 193 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 A0A0J9YWU9 116 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 TIMM21Q9BVV7 248 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 K7EMT4 169 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 BCL2L11O43521 198 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 APOC3P02656 99 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 COL5A1-AS1Q5SY13 56 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 MED12Q93074 2177 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 MUC4Q99102 2169 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 TM2D1Q9BX74 207 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 IGKV2-24A0A0C4DH68 120 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 AGRNO00468 2067 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 C2orf70A6NJV1 201 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 CRYBA2P53672 197 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 PMVKQ15126 192 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 DLEU7Q6UYE1 221 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 K7ERS5 55 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 MDFIQ99750 246 aa2.62□□□□□ -1.99
LPP-220ENST00000617246 BCL2P10415 239 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 OTPQ5XKR4 325 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 HIST2H2BCQ6DN03 193 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 COX7A2LO14548 114 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 GAGE6Q13070 117 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 CT83Q5H943 113 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 IGHV3-73A0A0B4J1V6 119 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 TRAV8-4A0A0B4J246 113 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 PRYO14603 147 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 TYMSP04818 313 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 FGF6P10767 208 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 C9orf47Q6ZRZ4 202 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 CDPF1Q6NVV7 123 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 RPP25LQ8N5L8 163 aaKnown RBP2.61□□□□□ -1.99
LPP-220ENST00000617246 LIME1Q9H400 295 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 SIGMAR1Q99720 223 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 A0A1B0GUT8 65 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 WISP3O95389 354 aaPredicted RBP2.61□□□□□ -1.99
LPP-220ENST00000617246 IGHG4P01861 327 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 PRR4Q16378 134 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 CASC2Q6XLA1 102 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 PLPPR1Q8TBJ4 325 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 DUSP21Q9H596 190 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 C8orf49Q96NF6 230 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 SIRPDQ9H106 197 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 H7C423 109 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 MEF2BQ02080 365 aaPredicted RBP2.61□□□□□ -1.99
LPP-220ENST00000617246 IGHV1-58A0A0C4DH39 117 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 TRBV12-3P01733 135 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 CLPSL2Q6UWE3 100 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 HIST1H4GQ99525 98 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 A0A1W2PP11 408 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 HERV-K104P63124 156 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 ZNF253O75346 499 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 CD177Q8N6Q3 437 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 NAA38Q9BRA0 125 aaKnown RBP2.61□□□□□ -1.99
LPP-220ENST00000617246 ALPK2Q86TB3 2170 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 ARHGAP32A7KAX9 2087 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 IGHV4-30-4P0DP06 118 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 KIAA0087Q14695 138 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 DEFB125Q8N687 156 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 PSG8Q9UQ74 426 aa2.61□□□□□ -1.99
LPP-220ENST00000617246 Q8N1Y9 231 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms