RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 IGHV7-81A0A0B4J1V7 117 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 IGHV3-35A0A0C4DH35 117 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 LINC01548A6NM66 108 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 EGR2P11161 476 aaPredicted RBP8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 CACNG7P62955 275 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 BRD3OSQ6XYD6 125 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 PRSS3P2Q8NHM4 247 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 RNF183Q96D59 192 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 C17orf77Q96MU5 243 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 CCL19Q99731 98 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 C20orf78Q9BR46 151 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 SLC25A39Q9BZJ4 359 aaPredicted RBP8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 PGPA6NDG6 321 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 IL4P05112 153 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 COL8A1P27658 744 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 MYCNOSP40205 109 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 ZNF562Q6V9R5 426 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 TMEM219Q86XT9 240 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 EXOC3-AS1Q8N2X6 119 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 HIGD1AQ9Y241 93 aa8.89□□□□□ -0.99
PCDHGA9-202ENST00000616887 IGLV11-55A0A075B6I3 123 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 TRAV8-1A0A0A6YYK1 113 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 P01737 135 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 SLC25A5P05141 298 aaKnown RBP8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 COX6B1P14854 86 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 UBE2E1P51965 193 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 FXYD7P58549 80 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 MINOS1Q5TGZ0 78 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 PSG8Q9UQ74 426 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 MINOS1-NBL1R4GNA1 71 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 PTPN13Q12923 2485 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 IGHV4-30-2A0A087WSY4 118 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 CENPVL3A0A0U1RRI6 287 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 SPINK8P0C7L1 97 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 LOXL1Q08397 574 aaPredicted RBP8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 ECSCRQ19T08 205 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 RBPMS2Q6ZRY4 209 aaKnown RBP8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 ZNF418Q8TF45 676 aaPredicted RBP8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 HIF1ANQ9NWT6 349 aa8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 NHP2Q9NX24 153 aaKnown RBP8.88□□□□□ -0.99
PCDHGA9-202ENST00000616887 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 Q9H3A6 140 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 ABCA12Q86UK0 2595 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 CSPG4Q6UVK1 2322 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 TRAV40A0A0B4J280 105 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 G3V318 75 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 HERV-K104P63124 156 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 EBI3Q14213 229 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 ZNF491Q8N8L2 437 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
PCDHGA9-202ENST00000616887 LOC389332A0A1B0GUA5 103 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 OR11H12B2RN74 326 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 NPFFO15130 113 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 ATP6V0E1O15342 81 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 LTAP01374 205 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 OR11H1Q8NG94 326 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 OR11H2Q8NH07 326 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 PHLDA1Q8WV24 401 aaPredicted RBP8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 DAZAP1Q96EP5 407 aaKnown RBP8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 RNF125Q96EQ8 232 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 PRSS22Q9GZN4 317 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 LINC00527Q9UJ94 153 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 EPDR1Q9UM22 224 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 ZNF469Q96JG9 3925 aaPredicted RBP8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 A0A096LNJ9 63 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 MT-ATP8P03928 68 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 IFI27P40305 119 aaPredicted RBP8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 ATP5J2P56134 94 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 LGALS9BQ3B8N2 356 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 LGALS9CQ6DKI2 356 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 HIST2H2BCQ6DN03 193 aa8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
PCDHGA9-202ENST00000616887 NPIPB5A8MRT5 1133 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 PPIFP30405 207 aaKnown RBP8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 GPR82Q96P67 336 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 E9PLD3 99 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 IGHV4-38-2P0DP08 117 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 GAGE13Q4V321 117 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 TTC9CQ8N5M4 171 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 C21orf62Q9NYP8 219 aa8.85□□□□□ -0.99
PCDHGA9-202ENST00000616887 OOSP1A8MZH6 123 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 IGLL5B9A064 214 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 NPIPB6E9PJ23 425 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 C10orf105Q8TEF2 133 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 CYSLTR1Q9Y271 337 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 A0A1B0GWB2 263 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 H3BRN7 92 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 M0R3E3 92 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 TCRAP04437 139 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 WFDC3Q8IUB2 231 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 ZNF414Q96IQ9 312 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 PIMREGQ9BSJ6 248 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 MLST8Q9BVC4 326 aa8.84□□□□□ -0.99
PCDHGA9-202ENST00000616887 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms