RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 C20orf197Q8N268 126 aa7.55□□□□□ -1.2
COL12A1-211ENST00000615798 H0YIZ8 118 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 PFN2P35080 140 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-211ENST00000615798 I3L3M4 83 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 ZNF561-AS1K7EIQ3 104 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-211ENST00000615798 LEAP2Q969E1 77 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 CRYGCP07315 174 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 TRIP6Q15654 476 aaKnown RBP7.54□□□□□ -1.2
COL12A1-211ENST00000615798 ALPK3Q96L96 1907 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 ETV2O00321 342 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-211ENST00000615798 C14orf178Q8N769 122 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-211ENST00000615798 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
COL12A1-211ENST00000615798 COX7B2Q8TF08 81 aa7.54□□□□□ -1.2
COL12A1-211ENST00000615798 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
COL12A1-211ENST00000615798 C17orf98A8MV24 154 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 C16orf47Q6ZP98 133 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-211ENST00000615798 GATA2P23769 480 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-211ENST00000615798 CLEC19AQ6UXS0 136 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 SPINK2P20155 84 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 HRCT1Q6UXD1 115 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 TMEM61Q8N0U2 210 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 LYPD1Q8N2G4 141 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 LINC00477Q96M19 166 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 ATP5J2P56134 94 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 PRSS46E5RG02 174 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 C12orf77C9JDV5 145 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 C16orf97H3BN30 126 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 CD55P08174 381 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 FAM110AQ9BQ89 295 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 Q6ZVH6 145 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 ITLN1Q8WWA0 313 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 IMUPQ9GZP8 106 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 HIGD1BQ9P298 99 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 DOPEY1Q5JWR5 2465 aa7.53□□□□□ -1.2
COL12A1-211ENST00000615798 DEFB123Q8N688 67 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 ATG2AQ2TAZ0 1938 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 IGLC6P0CF74 106 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 HIGD2BQ4VC39 106 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 LIME1Q9H400 295 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 MT-ATP8P03928 68 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 C16orf54Q6UWD8 224 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 SERP2Q8N6R1 65 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 FOXE3Q13461 319 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 NTN3O00634 580 aaPredicted RBP7.52□□□□□ -1.21
COL12A1-211ENST00000615798 DEFB105AQ8NG35 78 aa7.52□□□□□ -1.21
COL12A1-211ENST00000615798 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
COL12A1-211ENST00000615798 CCL4P13236 92 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 C5orf64Q2M2E5 130 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 GAFA1Q96PS6 74 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 C10orf91Q5T1B1 145 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 TMEM75Q8N9X5 138 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 TRGV1A0A0A0MS02 117 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 TMEM171Q8WVE6 324 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 TMEM256-PLSCR3K7ERE1 68 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 PRCDQ00LT1 54 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 GFI1Q99684 422 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 TEX36Q5VZQ5 186 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 EXOC3-AS1Q8N2X6 119 aa7.51□□□□□ -1.21
COL12A1-211ENST00000615798 TRBV25-1A0A075B6N4 114 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 GATA1P15976 413 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-211ENST00000615798 CFHR1Q03591 330 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 FOXL2NBQ6ZUU3 175 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 PAQR4Q8N4S7 273 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-211ENST00000615798 WIPF2Q8TF74 440 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-211ENST00000615798 LINC00479Q96M42 142 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 MRPL35Q9NZE8 188 aaKnown RBP7.5□□□□□ -1.21
COL12A1-211ENST00000615798 K7EMI3 77 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 RHOHQ15669 191 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 LY6EQ16553 131 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 MRPL51Q4U2R6 128 aaKnown RBP7.5□□□□□ -1.21
COL12A1-211ENST00000615798 C2orf66Q6UXQ4 117 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 TGFBR3LH3BV60 316 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 NDUFS7O75251 213 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 KLF14Q8TD94 323 aaPredicted RBP7.5□□□□□ -1.21
COL12A1-211ENST00000615798 NDPQ00604 133 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 WDR83OSQ9Y284 106 aa7.5□□□□□ -1.21
COL12A1-211ENST00000615798 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 LINC00694P0DN24 101 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 COL4A6Q14031 1691 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 S4R3C0 116 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 PRR31Q5SQ13 230 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 Q86TA4 180 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 ZNRF2Q8NHG8 242 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 C3orf36Q3SXR2 165 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 DYNAPQ8N1N2 210 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 C9JQL5 133 aa7.49□□□□□ -1.21
COL12A1-211ENST00000615798 LGALS9O00182 355 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 ADCYAP1P18509 176 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 TCF20Q9UGU0 1960 aaKnown RBP7.48□□□□□ -1.21
COL12A1-211ENST00000615798 ETDCA0A1B0GVM5 59 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 TFF1P04155 84 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 LOXL1Q08397 574 aaPredicted RBP7.48□□□□□ -1.21
COL12A1-211ENST00000615798 CYTL1Q9NRR1 136 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 QRFPP83859 136 aa7.48□□□□□ -1.21
COL12A1-211ENST00000615798 IGKV1D-33P01593 117 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms