RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 TRBV7-9A0A0J9YWB2 115 aa11.83□□□□□ -0.52
CBWD3-211ENST00000615061 UBE2G2P60604 165 aa11.83□□□□□ -0.52
CBWD3-211ENST00000615061 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
CBWD3-211ENST00000615061 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 PFDN1O60925 122 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 TCRAP04437 139 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 ARL6IP6Q8N6S5 226 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 GSN-AS1Q9NRJ2 163 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 FRAS1Q86XX4 4008 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
CBWD3-211ENST00000615061 CBY3A6NI87 242 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 SEC11BP0C7V7 166 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 TCTAP57738 103 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 LGALSLQ3ZCW2 172 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-211ENST00000615061 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 EIF4E3Q8N5X7 224 aaKnown RBP11.82□□□□□ -0.52
CBWD3-211ENST00000615061 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 MUC4Q99102 2169 aa11.82□□□□□ -0.52
CBWD3-211ENST00000615061 SNURFLB1AK76 121 aa11.81□□□□□ -0.52
CBWD3-211ENST00000615061 F6UZH7 168 aa11.81□□□□□ -0.52
CBWD3-211ENST00000615061 RGS13O14921 159 aa11.81□□□□□ -0.52
CBWD3-211ENST00000615061 MUC21Q5SSG8 566 aa11.81□□□□□ -0.52
CBWD3-211ENST00000615061 EPDR1Q9UM22 224 aa11.81□□□□□ -0.52
CBWD3-211ENST00000615061 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
CBWD3-211ENST00000615061 IGHV1OR15-1A0A075B7D0 117 aa11.8□□□□□ -0.52
CBWD3-211ENST00000615061 A0A1W2PRE2 83 aa11.8□□□□□ -0.52
CBWD3-211ENST00000615061 ANXA2RQ3ZCQ2 193 aa11.8□□□□□ -0.52
CBWD3-211ENST00000615061 LINC00467Q9BRT7 94 aa11.8□□□□□ -0.52
CBWD3-211ENST00000615061 NDUFAF3Q9BU61 184 aa11.8□□□□□ -0.52
CBWD3-211ENST00000615061 DNAH10Q8IVF4 4471 aa11.8□□□□□ -0.52
CBWD3-211ENST00000615061 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 GAGE7O76087 117 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 Q6AWC8 147 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 TMEM88Q6PEY1 159 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 Q6ZTI0 123 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 FAM213BQ8TBF2 198 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 KLF12Q9Y4X4 402 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 A0A1B0GV50 99 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 A0A1B0GVG6 124 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 FAM74A7A6NL05 159 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 IGLV2-11P01706 119 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 C1QBP02746 253 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 LINC00612Q8N6U2 182 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 ZNF680Q8NEM1 530 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 TREM1Q9NP99 234 aa11.79□□□□□ -0.52
CBWD3-211ENST00000615061 F5H768 121 aa11.78□□□□□ -0.52
CBWD3-211ENST00000615061 TPT1P13693 172 aaKnown RBP11.78□□□□□ -0.52
CBWD3-211ENST00000615061 DAZ2Q13117 558 aaKnown RBP11.78□□□□□ -0.52
CBWD3-211ENST00000615061 AKAP14Q86UN6 197 aa11.78□□□□□ -0.52
CBWD3-211ENST00000615061 CYB561D1Q8N8Q1 229 aa11.78□□□□□ -0.52
CBWD3-211ENST00000615061 C8orf49Q96NF6 230 aa11.78□□□□□ -0.52
CBWD3-211ENST00000615061 PSG8Q9UQ74 426 aa11.78□□□□□ -0.52
CBWD3-211ENST00000615061 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
CBWD3-211ENST00000615061 TRAV34A0A0B4J273 112 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 ATP5G1P05496 136 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 ATP5G3P48201 142 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 STOML3Q8TAV4 291 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 ATG101Q9BSB4 218 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 NAGKQ9UJ70 344 aa11.77□□□□□ -0.52
CBWD3-211ENST00000615061 DNAH2Q9P225 4427 aa11.77□□□□□ -0.53
CBWD3-211ENST00000615061 UMAD1C9J7I0 102 aa11.77□□□□□ -0.53
CBWD3-211ENST00000615061 IFNA7P01567 189 aa11.77□□□□□ -0.53
CBWD3-211ENST00000615061 TCL1AP56279 114 aa11.77□□□□□ -0.53
CBWD3-211ENST00000615061 EIF5AP63241 154 aaKnown RBP11.77□□□□□ -0.53
CBWD3-211ENST00000615061 PRNTQ86SH4 94 aa11.77□□□□□ -0.53
CBWD3-211ENST00000615061 MDFICQ9P1T7 246 aa11.77□□□□□ -0.53
CBWD3-211ENST00000615061 K7EQM0 130 aa11.76□□□□□ -0.53
CBWD3-211ENST00000615061 ZNF80P51504 273 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-211ENST00000615061 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
CBWD3-211ENST00000615061 MBD3L1Q8WWY6 194 aa11.76□□□□□ -0.53
CBWD3-211ENST00000615061 FAM210BQ96KR6 192 aa11.76□□□□□ -0.53
CBWD3-211ENST00000615061 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
CBWD3-211ENST00000615061 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
CBWD3-211ENST00000615061 IBA57Q5T440 356 aaKnown RBP11.75□□□□□ -0.53
CBWD3-211ENST00000615061 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
CBWD3-211ENST00000615061 TMEM75Q8N9X5 138 aa11.75□□□□□ -0.53
CBWD3-211ENST00000615061 PEX7O00628 323 aa11.74□□□□□ -0.53
CBWD3-211ENST00000615061 FAM159AQ6UWV7 190 aa11.74□□□□□ -0.53
CBWD3-211ENST00000615061 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
CBWD3-211ENST00000615061 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
CBWD3-211ENST00000615061 SPINK4O60575 86 aa11.74□□□□□ -0.53
CBWD3-211ENST00000615061 HOXA5P20719 270 aa11.74□□□□□ -0.53
CBWD3-211ENST00000615061 CST9LP1Q5W188 147 aa11.74□□□□□ -0.53
CBWD3-211ENST00000615061 MRPL16Q9NX20 251 aaKnown RBP11.74□□□□□ -0.53
CBWD3-211ENST00000615061 GNRH2O43555 120 aa11.73□□□□□ -0.53
CBWD3-211ENST00000615061 PAGE4O60829 102 aa11.73□□□□□ -0.53
CBWD3-211ENST00000615061 GCGP01275 180 aa11.73□□□□□ -0.53
CBWD3-211ENST00000615061 H2AFB1P0C5Y9 115 aa11.73□□□□□ -0.53
CBWD3-211ENST00000615061 OR5I1Q13606 314 aa11.73□□□□□ -0.53
CBWD3-211ENST00000615061 C11orf21Q9P2W6 132 aa11.73□□□□□ -0.53
CBWD3-211ENST00000615061 TRGV2A0A075B6R0 118 aa11.72□□□□□ -0.53
CBWD3-211ENST00000615061 ZNF415Q09FC8 603 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms