RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 Q9UF83 564 aa4□□□□□ -1.77
CPNE3-208ENST00000614678 DAD1P61803 113 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 ACOT6Q3I5F7 207 aaPredicted RBP3.99□□□□□ -1.77
CPNE3-208ENST00000614678 TOR2AQ5JU69 321 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 C9orf47Q6ZRZ4 202 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 ZNF575Q86XF7 245 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 TMED6Q8WW62 240 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 MRPL32Q9BYC8 188 aaKnown RBP3.99□□□□□ -1.77
CPNE3-208ENST00000614678 AAMDCQ9H7C9 122 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 C7orf71A4D174 169 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 F5H768 121 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 ATP5G3P48201 142 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 OR5I1Q13606 314 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 KHDC3LQ587J8 217 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 TRAV10A0A0B4J240 114 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 A6NJY4 79 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 C1QBP02746 253 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 SLC25A5P05141 298 aaKnown RBP3.99□□□□□ -1.77
CPNE3-208ENST00000614678 GUK1Q16774 197 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 AKAP14Q86UN6 197 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 CCDC28AQ8IWP9 274 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 PGPEP1Q9NXJ5 209 aa3.99□□□□□ -1.77
CPNE3-208ENST00000614678 CBY3A6NI87 242 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TAS2R60P59551 318 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 PDE6HQ13956 83 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 ZNF253O75346 499 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 NUDT3O95989 172 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 FUSP35637 526 aaKnown RBP eCLIP3.98□□□□□ -1.77
CPNE3-208ENST00000614678 ZNF138P52744 262 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TMEM41BQ5BJD5 291 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TMEM78Q5T7P6 136 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 DPPA3Q6W0C5 159 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 POM121L12Q8N7R1 296 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 ZNF471Q9BX82 626 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TRAV26-1A0A087WT03 109 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TRGV1A0A0A0MS02 117 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 H7BYZ3 331 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 CRIP1P50238 77 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TMEM183BQ1AE95 376 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 ANXA2RQ3ZCQ2 193 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 PRNTQ86SH4 94 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TMEM183AQ8IXX5 376 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 KCNRGQ8N5I3 272 aa3.98□□□□□ -1.77
CPNE3-208ENST00000614678 TMEM263Q8WUH6 116 aaKnown RBP3.98□□□□□ -1.77
CPNE3-208ENST00000614678 PCNPQ8WW12 178 aaKnown RBP3.98□□□□□ -1.77
CPNE3-208ENST00000614678 IGHV3-16A0A0C4DH30 117 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 LOC100131303A0A0U1RQF7 123 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 LINC00862A6NCI5 91 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 JTBO76095 146 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 TCRAP04437 139 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 TMUB2Q71RG4 321 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 GNPNAT1Q96EK6 184 aaPredicted RBP3.97□□□□□ -1.77
CPNE3-208ENST00000614678 VSIG2Q96IQ7 327 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 PSMG3Q9BT73 122 aaPredicted RBP3.97□□□□□ -1.77
CPNE3-208ENST00000614678 KRTAP1-5Q9BYS1 174 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 TIMM8BQ9Y5J9 83 aaPredicted RBP3.97□□□□□ -1.77
CPNE3-208ENST00000614678 TNFRSF18Q9Y5U5 241 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 IGHV3-73A0A0B4J1V6 119 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 SMIM9A6NGZ8 99 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 CRISP2P16562 243 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 FAM213BQ8TBF2 198 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 ZNF479Q96JC4 524 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 DERL1Q9BUN8 251 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 JPT2Q9H910 190 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 MUC21A0A0G2JKD1 596 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 MUC21A0A140T8X8 626 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 FAM74A7A6NL05 159 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 TEX46H3BTG2 121 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 PQLC2Q6ZP29 291 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 OTORQ9NRC9 128 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 DNAH5Q8TE73 4624 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 MAP1LC3B2A6NCE7 125 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 SSTP61278 116 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 MAP1LC3BQ9GZQ8 125 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 TREM1Q9NP99 234 aa3.97□□□□□ -1.77
CPNE3-208ENST00000614678 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.77
CPNE3-208ENST00000614678 PAGE4O60829 102 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 TYMSP04818 313 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 TAS2R45P59539 299 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 SAMD13Q5VXD3 122 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 LGALS9CQ6DKI2 356 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 CMTM2Q8TAZ6 248 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 SFT2D1Q8WV19 159 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 NDUFAF3Q9BU61 184 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 PGPEP1LA6NFU8 196 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 M0R036 132 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 LEPP41159 167 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 SERF2P84101 59 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 S100A7AQ86SG5 101 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 MRPL53Q96EL3 112 aaKnown RBP3.96□□□□□ -1.78
CPNE3-208ENST00000614678 C16orf74Q96GX8 76 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 ACTR3CQ9C0K3 210 aaPredicted RBP3.96□□□□□ -1.78
CPNE3-208ENST00000614678 EPDR1Q9UM22 224 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 PSG8Q9UQ74 426 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 LINC00588Q9Y4M8 146 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 IGHV1OR15-1A0A075B7D0 117 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 TMSB15BA0A087X1C1 80 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 IGKV3D-20A0A0C4DH25 116 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 SCO2A0A1W2PP80 73 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms