RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 FAM74A1Q5RGS3 127 aa15.77■□□□□ 0.12
FAM228B-208ENST00000613899 UPK3BQ9BT76 320 aa15.77■□□□□ 0.12
FAM228B-208ENST00000613899 WFDC1Q9HC57 220 aa15.77■□□□□ 0.12
FAM228B-208ENST00000613899 TP53TG3Q9ULZ0 132 aa15.77■□□□□ 0.12
FAM228B-208ENST00000613899 ALG5Q9Y673 324 aa15.77■□□□□ 0.12
FAM228B-208ENST00000613899 A0A1W2PPV4 95 aa15.76■□□□□ 0.11
FAM228B-208ENST00000613899 DIRC3C9JPN6 131 aa15.76■□□□□ 0.11
FAM228B-208ENST00000613899 ZNF415Q09FC8 603 aa15.76■□□□□ 0.11
FAM228B-208ENST00000613899 PQLC2Q6ZP29 291 aa15.76■□□□□ 0.11
FAM228B-208ENST00000613899 CMTM2Q8TAZ6 248 aa15.75■□□□□ 0.11
FAM228B-208ENST00000613899 TMED6Q8WW62 240 aa15.75■□□□□ 0.11
FAM228B-208ENST00000613899 VSIG2Q96IQ7 327 aa15.75■□□□□ 0.11
FAM228B-208ENST00000613899 ST6GAL2Q96JF0 529 aa15.75■□□□□ 0.11
FAM228B-208ENST00000613899 OTORQ9NRC9 128 aa15.75■□□□□ 0.11
FAM228B-208ENST00000613899 MRPS16Q9Y3D3 137 aaKnown RBP15.75■□□□□ 0.11
FAM228B-208ENST00000613899 PTTG1O95997 202 aa15.74■□□□□ 0.11
FAM228B-208ENST00000613899 ESRGQ1W209 222 aa15.74■□□□□ 0.11
FAM228B-208ENST00000613899 Q6AWC8 147 aa15.74■□□□□ 0.11
FAM228B-208ENST00000613899 Q6ZQT7 251 aa15.74■□□□□ 0.11
FAM228B-208ENST00000613899 HYLS1Q96M11 299 aa15.74■□□□□ 0.11
FAM228B-208ENST00000613899 MRPL16Q9NX20 251 aaKnown RBP15.74■□□□□ 0.11
FAM228B-208ENST00000613899 A0A096LPF7 62 aa15.73■□□□□ 0.11
FAM228B-208ENST00000613899 RAB2AP61019 212 aa15.73■□□□□ 0.11
FAM228B-208ENST00000613899 PGPA6NDG6 321 aa15.72■□□□□ 0.11
FAM228B-208ENST00000613899 EIF3GO75821 320 aaKnown RBP eCLIP15.72■□□□□ 0.11
FAM228B-208ENST00000613899 TNP2Q05952 138 aa15.72■□□□□ 0.11
FAM228B-208ENST00000613899 MUC21Q5SSG8 566 aa15.72■□□□□ 0.11
FAM228B-208ENST00000613899 ARL6IP6Q8N6S5 226 aa15.72■□□□□ 0.11
FAM228B-208ENST00000613899 RPH3ALQ9UNE2 315 aa15.72■□□□□ 0.11
FAM228B-208ENST00000613899 DNAH11Q96DT5 4516 aa15.72■□□□□ 0.11
FAM228B-208ENST00000613899 A0A1W2PPQ1 181 aa15.71■□□□□ 0.11
FAM228B-208ENST00000613899 SLAQ13239 276 aa15.71■□□□□ 0.11
FAM228B-208ENST00000613899 FAM159AQ6UWV7 190 aa15.71■□□□□ 0.11
FAM228B-208ENST00000613899 OR10G4Q8NGN3 311 aa15.71■□□□□ 0.11
FAM228B-208ENST00000613899 OR10G9Q8NGN4 311 aa15.71■□□□□ 0.11
FAM228B-208ENST00000613899 OR10G7Q8NGN6 311 aa15.71■□□□□ 0.11
FAM228B-208ENST00000613899 MED28Q9H204 178 aa15.71■□□□□ 0.11
FAM228B-208ENST00000613899 TRGV11A0A075B6L2 103 aa15.7■□□□□ 0.1
FAM228B-208ENST00000613899 PAX4O43316 350 aa15.7■□□□□ 0.1
FAM228B-208ENST00000613899 IGHV3-53P01767 116 aa15.7■□□□□ 0.1
FAM228B-208ENST00000613899 PRO0255Q9UI72 69 aa15.7■□□□□ 0.1
FAM228B-208ENST00000613899 ICOSQ9Y6W8 199 aa15.7■□□□□ 0.1
FAM228B-208ENST00000613899 CDC34P49427 236 aaPredicted RBP15.69■□□□□ 0.1
FAM228B-208ENST00000613899 ZNF575Q86XF7 245 aa15.69■□□□□ 0.1
FAM228B-208ENST00000613899 OR2G3Q8NGZ4 309 aa15.69■□□□□ 0.1
FAM228B-208ENST00000613899 AQP10Q96PS8 301 aa15.69■□□□□ 0.1
FAM228B-208ENST00000613899 DYNC1H1Q14204 4646 aaKnown RBP15.69■□□□□ 0.1
FAM228B-208ENST00000613899 TMEM183BQ1AE95 376 aa15.68■□□□□ 0.1
FAM228B-208ENST00000613899 GOLT1AQ6ZVE7 132 aa15.68■□□□□ 0.1
FAM228B-208ENST00000613899 TMEM183AQ8IXX5 376 aa15.68■□□□□ 0.1
FAM228B-208ENST00000613899 HSD17B11Q8NBQ5 300 aa15.68■□□□□ 0.1
FAM228B-208ENST00000613899 SPXQ9BT56 116 aa15.68■□□□□ 0.1
FAM228B-208ENST00000613899 PSMG3Q9BT73 122 aaPredicted RBP15.68■□□□□ 0.1
FAM228B-208ENST00000613899 KRTAP1-5Q9BYS1 174 aa15.68■□□□□ 0.1
FAM228B-208ENST00000613899 MDFICQ9P1T7 246 aa15.68■□□□□ 0.1
FAM228B-208ENST00000613899 HMGB3O15347 200 aaKnown RBP15.67■□□□□ 0.1
FAM228B-208ENST00000613899 ARL14EPLP0DKL9 152 aa15.67■□□□□ 0.1
FAM228B-208ENST00000613899 BTF3P20290 206 aaKnown RBP15.67■□□□□ 0.1
FAM228B-208ENST00000613899 TDRG1Q3Y452 100 aa15.67■□□□□ 0.1
FAM228B-208ENST00000613899 CRYBA4P53673 196 aa15.66■□□□□ 0.1
FAM228B-208ENST00000613899 ASB13Q8WXK3 278 aa15.66■□□□□ 0.1
FAM228B-208ENST00000613899 NAGKQ9UJ70 344 aa15.66■□□□□ 0.1
FAM228B-208ENST00000613899 HHLA3Q9XRX5 114 aa15.66■□□□□ 0.1
FAM228B-208ENST00000613899 TRAV21A0A0B4J279 112 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 SERTM2A0A1B0GWG4 89 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 MBP02144 154 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 STAG3L2P0CL84 134 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 STAG3L3P0CL85 134 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 FHL2Q14192 279 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 RASL10AQ92737 203 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 C8orf49Q96NF6 230 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 KRTAP17-1Q9BYP8 105 aa15.65■□□□□ 0.1
FAM228B-208ENST00000613899 TRGV4A0A0C4DH28 118 aa15.64■□□□□ 0.09
FAM228B-208ENST00000613899 GIPP09681 153 aaPredicted RBP15.64■□□□□ 0.09
FAM228B-208ENST00000613899 ATP6V0CP27449 155 aa15.64■□□□□ 0.09
FAM228B-208ENST00000613899 GNG5P63218 68 aa15.64■□□□□ 0.09
FAM228B-208ENST00000613899 SERF2P84101 59 aa15.64■□□□□ 0.09
FAM228B-208ENST00000613899 MRPL23Q16540 153 aaKnown RBP15.64■□□□□ 0.09
FAM228B-208ENST00000613899 TREM1Q9NP99 234 aa15.64■□□□□ 0.09
FAM228B-208ENST00000613899 TRAV8-1A0A0A6YYK1 113 aa15.63■□□□□ 0.09
FAM228B-208ENST00000613899 C16orf90A8MZG2 172 aa15.63■□□□□ 0.09
FAM228B-208ENST00000613899 F6UZH7 168 aa15.63■□□□□ 0.09
FAM228B-208ENST00000613899 C5orf17Q8NAS9 161 aa15.63■□□□□ 0.09
FAM228B-208ENST00000613899 RAB24Q969Q5 203 aa15.63■□□□□ 0.09
FAM228B-208ENST00000613899 NDFIP1Q9BT67 221 aa15.63■□□□□ 0.09
FAM228B-208ENST00000613899 SIVA1O15304 175 aa15.62■□□□□ 0.09
FAM228B-208ENST00000613899 IQCF2Q8IXL9 164 aa15.62■□□□□ 0.09
FAM228B-208ENST00000613899 PCLOQ9Y6V0 5065 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 K7EQM0 130 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 SFTA3P0C7M3 94 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 GCHFRP30047 84 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 INO80EQ8NBZ0 244 aaPredicted RBP15.61■□□□□ 0.09
FAM228B-208ENST00000613899 SUN5Q8TC36 379 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 TVP23CQ96ET8 276 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 ZNF479Q96JC4 524 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 KCNS1Q96KK3 526 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 SDF2L1Q9HCN8 221 aa15.61■□□□□ 0.09
FAM228B-208ENST00000613899 NXPH4O95158 308 aa15.6■□□□□ 0.09
FAM228B-208ENST00000613899 NEGR1Q7Z3B1 354 aa15.6■□□□□ 0.09
FAM228B-208ENST00000613899 PCNPQ8WW12 178 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms