RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 TRAV26-2A0A0B4J265 109 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 IGHV3-53P01767 116 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 ESDP10768 282 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 MALP21145 153 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 LGALS9BQ3B8N2 356 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 LGALS9CQ6DKI2 356 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 TP53TG1Q9Y2A0 90 aa10.86□□□□□ -0.67
GGA3-220ENST00000613421 CR1LQ2VPA4 569 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 M0R2P5 195 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 HLA-DMBP28068 263 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 KLF5Q13887 457 aaPredicted RBP10.85□□□□□ -0.67
GGA3-220ENST00000613421 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 NPBQ8NG41 125 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 K7EIM0 57 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 NPSP0C0P6 89 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 IGFBPL1Q8WX77 278 aa10.85□□□□□ -0.67
GGA3-220ENST00000613421 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
GGA3-220ENST00000613421 RPL35AP18077 110 aaKnown RBP10.84□□□□□ -0.67
GGA3-220ENST00000613421 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
GGA3-220ENST00000613421 BDP1A6H8Y1 2624 aa10.84□□□□□ -0.67
GGA3-220ENST00000613421 MAJINQ3KP22 176 aa10.84□□□□□ -0.67
GGA3-220ENST00000613421 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
GGA3-220ENST00000613421 DYNAPQ8N1N2 210 aa10.84□□□□□ -0.67
GGA3-220ENST00000613421 FAM167A-AS1Q96KT0 104 aa10.84□□□□□ -0.67
GGA3-220ENST00000613421 IGLV2-23P01705 113 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 P0C879 139 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 IGHV7-4-1A0A0J9YVY3 117 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 LINC01619G3V211 115 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 COX8AP10176 69 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 NPC2P61916 151 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 PHLDA1Q8WV24 401 aaPredicted RBP10.83□□□□□ -0.68
GGA3-220ENST00000613421 NUP210LQ5VU65 1888 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 RASL10AQ92737 203 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 TIMM21Q9BVV7 248 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 C1QTNF4Q9BXJ3 329 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 MUC6Q6W4X9 2439 aa10.83□□□□□ -0.68
GGA3-220ENST00000613421 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 INS-IGF2F8WCM5 200 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 H3BUA1 57 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 J3QLI3 93 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 EGR2P11161 476 aaPredicted RBP10.82□□□□□ -0.68
GGA3-220ENST00000613421 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 C1orf159Q96HA4 380 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 IGHV7-81A0A0B4J1V7 117 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 CENPVL3A0A0U1RRI6 287 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 TMEM141Q96I45 108 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 SMIM2Q9BVW6 85 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 CDKN1BP46527 198 aa10.82□□□□□ -0.68
GGA3-220ENST00000613421 DLX4Q92988 240 aaPredicted RBP10.82□□□□□ -0.68
GGA3-220ENST00000613421 KNCNA6PVL3 124 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 SIGMAR1Q99720 223 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 LINC00158P58513 81 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 SPXQ9BT56 116 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 C10orf142B7Z368 130 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 RHODO00212 210 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 IGLV1-47P01700 117 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 TRAV12-2A0A075B6T6 113 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 RBAKDNA6NC62 111 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 TCTEX1D4Q5JR98 221 aa10.81□□□□□ -0.68
GGA3-220ENST00000613421 MRPL53Q96EL3 112 aaKnown RBP10.8□□□□□ -0.68
GGA3-220ENST00000613421 NUPR1O60356 82 aa10.8□□□□□ -0.68
GGA3-220ENST00000613421 PMVKQ15126 192 aa10.8□□□□□ -0.68
GGA3-220ENST00000613421 E7EUB6 86 aa10.8□□□□□ -0.68
GGA3-220ENST00000613421 XCL2Q9UBD3 114 aa10.8□□□□□ -0.68
GGA3-220ENST00000613421 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 TEX22C9J3V5 150 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 I3L3M4 83 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
GGA3-220ENST00000613421 KIR2DL5BA0A0G2JN68 375 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 KIR2DL5BA0A0G2JPC4 375 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 KIR2DL5AQ8N109 375 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 TMEM86BQ8N661 226 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 Q96MF0 132 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 PRO3102Q9H379 93 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 CFHR4Q92496 578 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 ZNF747Q9BV97 191 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 MYMXA0A1B0GTQ4 84 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 BRWD1-AS2P59051 145 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 ADORA2A-AS1P86434 159 aa10.79□□□□□ -0.68
GGA3-220ENST00000613421 TRAV13-1A0A0B4J241 112 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 FOXE3Q13461 319 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 ZNF295-AS1Q8N0V1 137 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 MED12LQ86YW9 2145 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 TRAV8-4A0A0B4J246 113 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 PROP1O75360 226 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 CTSGP08311 255 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 TMEM95Q3KNT9 176 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 NEGR1Q7Z3B1 354 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 MRPL36Q9P0J6 103 aaKnown RBP10.78□□□□□ -0.68
GGA3-220ENST00000613421 A0A087WX48 190 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 ELANEP08246 267 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms