RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 Q8N9W7 124 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 SIGLEC8Q9NYZ4 499 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 IGHV7-81A0A0B4J1V7 117 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 IGHV4-61A0A0C4DH41 118 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 IL4P05112 153 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 FMC1Q96HJ9 113 aa12.83□□□□□ -0.36
CNOT3-208ENST00000613073 IGKV2D-26A0A0A0MRZ7 120 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 H3BMG7 143 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 GFRA4Q9GZZ7 299 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 ZNF492Q9P255 531 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 SCGB1A1P11684 91 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 Q86TA4 180 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
CNOT3-208ENST00000613073 POLQO75417 2590 aa12.82□□□□□ -0.36
CNOT3-208ENST00000613073 CENPVL3A0A0U1RRI6 287 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 NPIPB5A8MRT5 1133 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 EGR2P11161 476 aaPredicted RBP12.81□□□□□ -0.36
CNOT3-208ENST00000613073 NRGNQ92686 78 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 SPANXB1Q9NS25 103 aaPredicted RBP12.81□□□□□ -0.36
CNOT3-208ENST00000613073 EPG5Q9HCE0 2579 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 K7EQM0 130 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 NPFFO15130 113 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 LGALS9BQ3B8N2 356 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 LGALS9CQ6DKI2 356 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 TTC9CQ8N5M4 171 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 ZNF491Q8N8L2 437 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 ATP5J2P56134 94 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 RIGQ13278 110 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 ECSCRQ19T08 205 aa12.81□□□□□ -0.36
CNOT3-208ENST00000613073 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
CNOT3-208ENST00000613073 BRD3OSQ6XYD6 125 aa12.8□□□□□ -0.36
CNOT3-208ENST00000613073 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
CNOT3-208ENST00000613073 C17orf77Q96MU5 243 aa12.8□□□□□ -0.36
CNOT3-208ENST00000613073 PIMREGQ9BSJ6 248 aa12.8□□□□□ -0.36
CNOT3-208ENST00000613073 MFAP4P55083 255 aa12.8□□□□□ -0.36
CNOT3-208ENST00000613073 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
CNOT3-208ENST00000613073 TMEM189A5PLL7 270 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 LINC01548A6NM66 108 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 NPIPB6E9PJ23 425 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 PPIFP30405 207 aaKnown RBP12.79□□□□□ -0.36
CNOT3-208ENST00000613073 TMEM219Q86XT9 240 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 C21orf62Q9NYP8 219 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 IGHV3-35A0A0C4DH35 117 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
CNOT3-208ENST00000613073 DPF1Q92782 380 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 PRELID3AQ96N28 172 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 CHAC1Q9BUX1 264 aa12.79□□□□□ -0.36
CNOT3-208ENST00000613073 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.78□□□□□ -0.369e-7■■■□□ 15.5
CNOT3-208ENST00000613073 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 ZNF785A8K8V0 405 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 J3QR89 54 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 AGRNO00468 2067 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 IGHV3OR16-8A0A075B7F1 116 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 SIVA1O15304 175 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 ATP6V0E1O15342 81 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 LCNL1Q6ZST4 164 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 BBC3Q96PG8 261 aaPredicted RBP12.78□□□□□ -0.36
CNOT3-208ENST00000613073 SHANK2-AS3Q9BTD1 123 aa12.78□□□□□ -0.36
CNOT3-208ENST00000613073 TRAV40A0A0B4J280 105 aa12.77□□□□□ -0.36
CNOT3-208ENST00000613073 HBDP02042 147 aa12.77□□□□□ -0.36
CNOT3-208ENST00000613073 C10orf105Q8TEF2 133 aa12.77□□□□□ -0.36
CNOT3-208ENST00000613073 USP9YO00507 2555 aaPredicted RBP12.77□□□□□ -0.36
CNOT3-208ENST00000613073 GEMIN7Q9H840 131 aaKnown RBP12.77□□□□□ -0.37
CNOT3-208ENST00000613073 G3V318 75 aa12.76□□□□□ -0.37
CNOT3-208ENST00000613073 H3BRN7 92 aa12.76□□□□□ -0.37
CNOT3-208ENST00000613073 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
CNOT3-208ENST00000613073 FBN2P35556 2912 aa12.76□□□□□ -0.37
CNOT3-208ENST00000613073 FCER1GP30273 86 aa12.76□□□□□ -0.37
CNOT3-208ENST00000613073 PAX8Q06710 450 aa12.76□□□□□ -0.37
CNOT3-208ENST00000613073 C20orf78Q9BR46 151 aa12.76□□□□□ -0.37
CNOT3-208ENST00000613073 IGLV2-11P01706 119 aa12.75□□□□□ -0.37
CNOT3-208ENST00000613073 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
CNOT3-208ENST00000613073 TMEM14CQ9P0S9 112 aa12.75□□□□□ -0.37
CNOT3-208ENST00000613073 WI2-2373I1.2A0A1W2PRP0 233 aa12.75□□□□□ -0.37
CNOT3-208ENST00000613073 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
CNOT3-208ENST00000613073 ZNF479Q96JC4 524 aa12.75□□□□□ -0.37
CNOT3-208ENST00000613073 CSPG4Q6UVK1 2322 aa12.75□□□□□ -0.37
CNOT3-208ENST00000613073 ZANQ9Y493 2812 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 C15orf32Q32M92 178 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 LINC00527Q9UJ94 153 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 ANKRD17O75179 2603 aaKnown RBP12.74□□□□□ -0.37
CNOT3-208ENST00000613073 TRBV19A0A075B6N1 114 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 CTSGP08311 255 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 IGHV4-38-2P0DP08 117 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 FOXI2Q6ZQN5 318 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
CNOT3-208ENST00000613073 TRBV25-1A0A075B6N4 114 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 IGHV1-69DA0A0B4J2H0 117 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 IGLL5B9A064 214 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 NPYP01303 97 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 IGHV1-69P01742 117 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 CRIP1P50238 77 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 ORMDL3Q8N138 153 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 PRSS1P07477 247 aa12.73□□□□□ -0.37
CNOT3-208ENST00000613073 F8W1H4 67 aa12.72□□□□□ -0.37
CNOT3-208ENST00000613073 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms