RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 ZNF672Q499Z4 452 aaPredicted RBP12.81□□□□□ -0.36
TSKU-205ENST00000612930 DYNAPQ8N1N2 210 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 CARD19Q96LW7 228 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 F8VRH5 84 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 RNF183Q96D59 192 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 H7C1H1 209 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 ZFP2Q6ZN57 461 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 COX7A1P24310 79 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 SFTA2Q6UW10 78 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 FANCD2OSQ96PS1 177 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 C11orf21Q9P2W6 132 aa12.8□□□□□ -0.36
TSKU-205ENST00000612930 PSMB2P49721 201 aa12.79□□□□□ -0.36
TSKU-205ENST00000612930 DMXL2Q8TDJ6 3036 aa12.79□□□□□ -0.36
TSKU-205ENST00000612930 TRAV12-1A0A0B4J245 112 aa12.79□□□□□ -0.36
TSKU-205ENST00000612930 MFAP4P55083 255 aa12.79□□□□□ -0.36
TSKU-205ENST00000612930 IL17RELQ6ZVW7 336 aa12.79□□□□□ -0.36
TSKU-205ENST00000612930 ERG28Q9UKR5 140 aa12.79□□□□□ -0.36
TSKU-205ENST00000612930 MUC3AQ02505 3323 aa12.79□□□□□ -0.36
TSKU-205ENST00000612930 IGHV3-23P01764 117 aa12.78□□□□□ -0.36
TSKU-205ENST00000612930 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
TSKU-205ENST00000612930 RNF5Q99942 180 aa12.78□□□□□ -0.36
TSKU-205ENST00000612930 PKDREJQ9NTG1 2253 aa12.77□□□□□ -0.36
TSKU-205ENST00000612930 IGLV11-55A0A075B6I3 123 aa12.77□□□□□ -0.36
TSKU-205ENST00000612930 UBE2D1P51668 147 aa12.77□□□□□ -0.36
TSKU-205ENST00000612930 IGFBPL1Q8WX77 278 aa12.77□□□□□ -0.36
TSKU-205ENST00000612930 LOC107984156A0A0G2JMH3 177 aa12.77□□□□□ -0.37
TSKU-205ENST00000612930 CDX4O14627 284 aaPredicted RBP12.77□□□□□ -0.37
TSKU-205ENST00000612930 ARL17AQ8IVW1 177 aa12.77□□□□□ -0.37
TSKU-205ENST00000612930 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 TIMM23O14925 209 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 UBE2D3P61077 147 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 UBE2D2P62837 147 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 PPDPFLQ8WWR9 84 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 UFC1Q9Y3C8 167 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 C5orf64Q2M2E5 130 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 PLEKHB2Q96CS7 222 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 RAXQ9Y2V3 346 aa12.76□□□□□ -0.37
TSKU-205ENST00000612930 IGHV3OR16-8A0A075B7F1 116 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 BSPH1Q075Z2 132 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 KLK15Q9H2R5 256 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 PRADC1Q9BSG0 188 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 C21orf62Q9NYP8 219 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 NCOR1O75376 2440 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 PRSS29PA6NIE9 313 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 TEN1Q86WV5 123 aa12.75□□□□□ -0.37
TSKU-205ENST00000612930 RALYQ9UKM9 306 aaKnown RBP12.75□□□□□ -0.37
TSKU-205ENST00000612930 NBR2O15453 112 aa12.74□□□□□ -0.37
TSKU-205ENST00000612930 RNF182Q8N6D2 247 aa12.74□□□□□ -0.37
TSKU-205ENST00000612930 RNASE6Q93091 150 aaKnown RBP12.74□□□□□ -0.37
TSKU-205ENST00000612930 SCGB3A1Q96QR1 104 aa12.74□□□□□ -0.37
TSKU-205ENST00000612930 SMIM2Q9BVW6 85 aa12.74□□□□□ -0.37
TSKU-205ENST00000612930 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
TSKU-205ENST00000612930 A6NJY4 79 aa12.73□□□□□ -0.37
TSKU-205ENST00000612930 ZNF815PA8K554 130 aa12.73□□□□□ -0.37
TSKU-205ENST00000612930 CD7P09564 240 aa12.73□□□□□ -0.37
TSKU-205ENST00000612930 Q6ZQT7 251 aa12.73□□□□□ -0.37
TSKU-205ENST00000612930 BOD1L1Q8NFC6 3051 aa12.73□□□□□ -0.37
TSKU-205ENST00000612930 CTSGP08311 255 aa12.73□□□□□ -0.37
TSKU-205ENST00000612930 TCL1BO95988 128 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 COX6B1P14854 86 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 TOMM6Q96B49 74 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 VKORC1Q9BQB6 163 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 SS18L2Q9UHA2 77 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 IGHV3-35A0A0C4DH35 117 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
TSKU-205ENST00000612930 OR11H6Q8NGC7 330 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 AGPAT4-IT1Q9H0P7 198 aa12.72□□□□□ -0.37
TSKU-205ENST00000612930 SLC25A16P16260 332 aa12.71□□□□□ -0.37
TSKU-205ENST00000612930 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.37
TSKU-205ENST00000612930 SBSPONQ8IVN8 264 aa12.71□□□□□ -0.37
TSKU-205ENST00000612930 KIR2DL4Q99706 377 aa12.71□□□□□ -0.37
TSKU-205ENST00000612930 RP1L1Q8IWN7 2480 aaPredicted RBP12.71□□□□□ -0.37
TSKU-205ENST00000612930 NDPQ00604 133 aa12.71□□□□□ -0.38
TSKU-205ENST00000612930 BAALCQ8WXS3 180 aa12.71□□□□□ -0.38
TSKU-205ENST00000612930 RASL10AQ92737 203 aa12.71□□□□□ -0.38
TSKU-205ENST00000612930 ONECUT1Q9UBC0 465 aa12.71□□□□□ -0.38
TSKU-205ENST00000612930 DEFB109BQ30KR1 87 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 KLHL30-AS1Q8NEE0 82 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 NPBQ8NG41 125 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 ANAPC13Q9BS18 74 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 IGHV4-4A0A075B6R2 117 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 RBAKDNA6NC62 111 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 NDUFA11Q86Y39 141 aa12.7□□□□□ -0.38
TSKU-205ENST00000612930 SPANXN1Q5VSR9 72 aa12.69□□□□□ -0.38
TSKU-205ENST00000612930 CSMD1Q96PZ7 3565 aa12.69□□□□□ -0.38
TSKU-205ENST00000612930 ORMDL2Q53FV1 153 aa12.69□□□□□ -0.38
TSKU-205ENST00000612930 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.69□□□□□ -0.38
TSKU-205ENST00000612930 DYNLRB1Q9NP97 96 aa12.69□□□□□ -0.38
TSKU-205ENST00000612930 MSRB2Q9Y3D2 182 aa12.69□□□□□ -0.38
TSKU-205ENST00000612930 LYNX1G3V0Z9 82 aa12.68□□□□□ -0.38
TSKU-205ENST00000612930 LYNX1P0DP58 116 aa12.68□□□□□ -0.38
TSKU-205ENST00000612930 ANKRD29Q8N6D5 301 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms