RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 H3BMG7 143 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 M0R381 172 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 M0R3E3 92 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 SCGB1C2P0DMR2 95 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 TMEM30BQ3MIR4 351 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 PSMG4Q5JS54 123 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 EXOC3-AS1Q8N2X6 119 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
FAM3A-221ENST00000612856 MRAPQ8TCY5 172 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 SLC25A39Q9BZJ4 359 aaPredicted RBP8.59□□□□□ -1.03
FAM3A-221ENST00000612856 NOTCH1P46531 2555 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 C15orf65H3BRN8 121 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 SNRPD3P62318 126 aaKnown RBP8.59□□□□□ -1.03
FAM3A-221ENST00000612856 WFDC2Q14508 124 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 Q8TCH9 128 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 MS4A6AQ9H2W1 248 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 CENPVL3A0A0U1RRI6 287 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 A0A1W2PPM0 123 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 MINOS1Q5TGZ0 78 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 C19orf24Q9BVV8 132 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 MINOS1-NBL1R4GNA1 71 aa8.59□□□□□ -1.03
FAM3A-221ENST00000612856 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 PLA2G2AP14555 144 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 PCP2Q8IVA1 136 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 KLK15Q9H2R5 256 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 RPP21Q9H633 154 aaKnown RBP8.58□□□□□ -1.04
FAM3A-221ENST00000612856 TMEM160Q9NX00 188 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 H3BRM9 83 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 COX8AP10176 69 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 CD300EQ496F6 205 aaPredicted RBP8.58□□□□□ -1.04
FAM3A-221ENST00000612856 TEX36Q5VZQ5 186 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 DGAT2L7PQ6IED9 249 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 Q6ZS49 121 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 ANAPC13Q9BS18 74 aa8.58□□□□□ -1.04
FAM3A-221ENST00000612856 IGLV2-14P01704 120 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 RIGQ13278 110 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 GDF5OSQ5U4N7 250 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 SMIM27A0A1W2PRY6 76 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.57□□□□□ -1.04
FAM3A-221ENST00000612856 FCN3O75636 299 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 Q8TAT8 98 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 APOMO95445 188 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 OR11H1Q8NG94 326 aa8.57□□□□□ -1.04
FAM3A-221ENST00000612856 CKS2P33552 79 aa8.56□□□□□ -1.04
FAM3A-221ENST00000612856 WT1-ASQ06250 92 aa8.56□□□□□ -1.04
FAM3A-221ENST00000612856 CIARTQ8N365 385 aaPredicted RBP8.56□□□□□ -1.04
FAM3A-221ENST00000612856 SCRT2Q9NQ03 307 aa8.56□□□□□ -1.04
FAM3A-221ENST00000612856 CHCHD1Q96BP2 118 aaKnown RBP8.56□□□□□ -1.04
FAM3A-221ENST00000612856 ZNF48Q96MX3 618 aaPredicted RBP8.56□□□□□ -1.04
FAM3A-221ENST00000612856 KMT2EQ8IZD2 1858 aa8.56□□□□□ -1.04
FAM3A-221ENST00000612856 RNASE4P34096 147 aaKnown RBP8.56□□□□□ -1.04
FAM3A-221ENST00000612856 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
FAM3A-221ENST00000612856 GAGE13Q4V321 117 aa8.56□□□□□ -1.04
FAM3A-221ENST00000612856 GTSCR1Q86UQ5 136 aa8.56□□□□□ -1.04
FAM3A-221ENST00000612856 TMEM167AQ8TBQ9 72 aa8.56□□□□□ -1.04
FAM3A-221ENST00000612856 RPS20P60866 119 aaKnown RBP8.55□□□□□ -1.04
FAM3A-221ENST00000612856 SRSF9Q13242 221 aaKnown RBP eCLIP8.55□□□□□ -1.04
FAM3A-221ENST00000612856 TWIST1Q15672 202 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 RAX2Q96IS3 184 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 GPR82Q96P67 336 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 LY96Q9Y6Y9 160 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 H7C2G1 150 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 LINC01587Q99440 93 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 TRBV6-6A0A0A6YYG2 114 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 A0A1B0GUT8 65 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 FBXL19-AS1Q494R0 122 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 ZNF562Q6V9R5 426 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 PHLDA3Q9Y5J5 127 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 HCFC1P51610 2035 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
FAM3A-221ENST00000612856 IGKV2-40A0A087WW87 121 aaPredicted RBP8.54□□□□□ -1.04
FAM3A-221ENST00000612856 B5MCH6 92 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 NCR2O95944 276 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 LHBP01229 141 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 IGKV2D-40P01614 121 aaPredicted RBP8.54□□□□□ -1.04
FAM3A-221ENST00000612856 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
FAM3A-221ENST00000612856 NPIPB5A8MRT5 1133 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 SMKR1H3BMG3 65 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 MORN5Q5VZ52 161 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 COL27A1Q8IZC6 1860 aaPredicted RBP8.54□□□□□ -1.04
FAM3A-221ENST00000612856 PSMB2P49721 201 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 Q8N7P7 452 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 PRELID3AQ96N28 172 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 RHPN1-AS1Q9BWJ2 59 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 TMEM189A5PLL7 270 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 LMO4P61968 165 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 FOXE3Q13461 319 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 DTX2Q86UW9 622 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 CACNG8Q8WXS5 425 aa8.54□□□□□ -1.04
FAM3A-221ENST00000612856 PTPRBP23467 1997 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 STHQ8IWL8 128 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms