RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
PRKN-209ENST00000612485 Q8TAT8 98 aa12.04□□□□□ -0.48
PRKN-209ENST00000612485 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
PRKN-209ENST00000612485 TNP2Q05952 138 aa12.03□□□□□ -0.48
PRKN-209ENST00000612485 ESRGQ1W209 222 aa12.03□□□□□ -0.48
PRKN-209ENST00000612485 Q5BKY6 102 aa12.03□□□□□ -0.48
PRKN-209ENST00000612485 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
PRKN-209ENST00000612485 TP53TG3Q9ULZ0 132 aa12.03□□□□□ -0.48
PRKN-209ENST00000612485 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
PRKN-209ENST00000612485 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
PRKN-209ENST00000612485 ZNF415Q09FC8 603 aa12.02□□□□□ -0.49
PRKN-209ENST00000612485 ZNF266Q14584 549 aa12.02□□□□□ -0.49
PRKN-209ENST00000612485 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
PRKN-209ENST00000612485 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.49
PRKN-209ENST00000612485 ST6GAL2Q96JF0 529 aa12.02□□□□□ -0.49
PRKN-209ENST00000612485 LENEPQ9Y5L5 61 aa12.02□□□□□ -0.49
PRKN-209ENST00000612485 A0A096LPF7 62 aa12.01□□□□□ -0.49
PRKN-209ENST00000612485 DIRC3C9JPN6 131 aa12.01□□□□□ -0.49
PRKN-209ENST00000612485 FAM74A1Q5RGS3 127 aa12.01□□□□□ -0.49
PRKN-209ENST00000612485 Q6ZQT7 251 aa12.01□□□□□ -0.49
PRKN-209ENST00000612485 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
PRKN-209ENST00000612485 WFDC1Q9HC57 220 aa12.01□□□□□ -0.49
PRKN-209ENST00000612485 OTORQ9NRC9 128 aa12.01□□□□□ -0.49
PRKN-209ENST00000612485 A0A1W2PPQ1 181 aa12□□□□□ -0.49
PRKN-209ENST00000612485 A0A1W2PPV4 95 aa12□□□□□ -0.49
PRKN-209ENST00000612485 SLAQ13239 276 aa12□□□□□ -0.49
PRKN-209ENST00000612485 PQLC2Q6ZP29 291 aa12□□□□□ -0.49
PRKN-209ENST00000612485 CMTM2Q8TAZ6 248 aa12□□□□□ -0.49
PRKN-209ENST00000612485 TMED6Q8WW62 240 aa12□□□□□ -0.49
PRKN-209ENST00000612485 ASB13Q8WXK3 278 aa12□□□□□ -0.49
PRKN-209ENST00000612485 HYLS1Q96M11 299 aa12□□□□□ -0.49
PRKN-209ENST00000612485 MRPL16Q9NX20 251 aaKnown RBP12□□□□□ -0.49
PRKN-209ENST00000612485 RYR1P21817 5038 aa11.99□□□□□ -0.49
PRKN-209ENST00000612485 PAX4O43316 350 aa11.99□□□□□ -0.49
PRKN-209ENST00000612485 MUC21Q5SSG8 566 aa11.99□□□□□ -0.49
PRKN-209ENST00000612485 Q6AWC8 147 aa11.99□□□□□ -0.49
PRKN-209ENST00000612485 PGPA6NDG6 321 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 EIF3GO75821 320 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRKN-209ENST00000612485 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 BTF3P20290 206 aaKnown RBP11.98□□□□□ -0.49
PRKN-209ENST00000612485 FAM159AQ6UWV7 190 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 OR2T35Q8NGX2 323 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 PRO0255Q9UI72 69 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 ICOSQ9Y6W8 199 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 MUC4Q99102 2169 aa11.98□□□□□ -0.49
PRKN-209ENST00000612485 PCLOQ9Y6V0 5065 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 TRGV11A0A075B6L2 103 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 RAB2AP61019 212 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 OR10G4Q8NGN3 311 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 KRTAP1-5Q9BYS1 174 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 RPH3ALQ9UNE2 315 aa11.97□□□□□ -0.49
PRKN-209ENST00000612485 C16orf90A8MZG2 172 aa11.96□□□□□ -0.49
PRKN-209ENST00000612485 AQP10Q96PS8 301 aa11.96□□□□□ -0.49
PRKN-209ENST00000612485 SPXQ9BT56 116 aa11.96□□□□□ -0.49
PRKN-209ENST00000612485 MDFICQ9P1T7 246 aa11.96□□□□□ -0.49
PRKN-209ENST00000612485 HHLA3Q9XRX5 114 aa11.96□□□□□ -0.49
PRKN-209ENST00000612485 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.5
PRKN-209ENST00000612485 FXYD6-FXYD2A0A087WZ82 144 aa11.95□□□□□ -0.5
PRKN-209ENST00000612485 CRYBA4P53673 196 aa11.95□□□□□ -0.5
PRKN-209ENST00000612485 FHL2Q14192 279 aa11.95□□□□□ -0.5
PRKN-209ENST00000612485 TMEM183BQ1AE95 376 aa11.95□□□□□ -0.5
PRKN-209ENST00000612485 GOLT1AQ6ZVE7 132 aa11.95□□□□□ -0.5
PRKN-209ENST00000612485 TMEM183AQ8IXX5 376 aa11.95□□□□□ -0.5
PRKN-209ENST00000612485 TRGV4A0A0C4DH28 118 aa11.94□□□□□ -0.5
PRKN-209ENST00000612485 G3V3Q6 166 aa11.94□□□□□ -0.5
PRKN-209ENST00000612485 CDC34P49427 236 aaPredicted RBP11.94□□□□□ -0.5
PRKN-209ENST00000612485 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
PRKN-209ENST00000612485 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
PRKN-209ENST00000612485 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
PRKN-209ENST00000612485 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
PRKN-209ENST00000612485 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
PRKN-209ENST00000612485 NAGKQ9UJ70 344 aa11.94□□□□□ -0.5
PRKN-209ENST00000612485 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
PRKN-209ENST00000612485 SMLR1H3BR10 107 aa11.93□□□□□ -0.5
PRKN-209ENST00000612485 SIVA1O15304 175 aa11.93□□□□□ -0.5
PRKN-209ENST00000612485 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
PRKN-209ENST00000612485 HSD17B11Q8NBQ5 300 aa11.93□□□□□ -0.5
PRKN-209ENST00000612485 RASL10AQ92737 203 aa11.93□□□□□ -0.5
PRKN-209ENST00000612485 PSMG3Q9BT73 122 aaPredicted RBP11.93□□□□□ -0.5
PRKN-209ENST00000612485 TNFSF18Q9UNG2 199 aa11.93□□□□□ -0.5
PRKN-209ENST00000612485 SERTM2A0A1B0GWG4 89 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 NXPH4O95158 308 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 MBP02144 154 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 ARL14EPLP0DKL9 152 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 IQCF2Q8IXL9 164 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 TREM1Q9NP99 234 aa11.92□□□□□ -0.5
PRKN-209ENST00000612485 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
PRKN-209ENST00000612485 GNG5P63218 68 aa11.91□□□□□ -0.5
PRKN-209ENST00000612485 NEGR1Q7Z3B1 354 aa11.91□□□□□ -0.5
PRKN-209ENST00000612485 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
PRKN-209ENST00000612485 ZNF479Q96JC4 524 aa11.91□□□□□ -0.5
PRKN-209ENST00000612485 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
PRKN-209ENST00000612485 HSPG2P98160 4391 aa11.9□□□□□ -0.5
PRKN-209ENST00000612485 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
PRKN-209ENST00000612485 F6UZH7 168 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms