RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	GOLT1A	Q6ZVE7	132 aa		11.75	□□□□□ -0.53
CCND3-222	ENST00000612455	ZNF680	Q8NEM1	530 aa		11.75	□□□□□ -0.53
CCND3-222	ENST00000612455	CTXND1	A0A1B0GTU2	59 aa		11.74	□□□□□ -0.53
CCND3-222	ENST00000612455	IBA57	Q5T440	356 aa	Known RBP	11.74	□□□□□ -0.53
CCND3-222	ENST00000612455	POM121L12	Q8N7R1	296 aa		11.74	□□□□□ -0.53
CCND3-222	ENST00000612455	TVP23C	Q96ET8	276 aa		11.74	□□□□□ -0.53
CCND3-222	ENST00000612455	GSN-AS1	Q9NRJ2	163 aa		11.74	□□□□□ -0.53
CCND3-222	ENST00000612455		A0A0D9SG52	128 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	SERTM2	A0A1B0GWG4	89 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455		A0A1W2PRE2	83 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455		F5H768	121 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	RGS13	O14921	159 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	TCL1A	P56279	114 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	SUMO1	P63165	101 aa	Known RBP	11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	GNG5	P63218	68 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	C15orf53	Q8NAA6	179 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	C5orf17	Q8NAS9	161 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	C18orf15	Q96N68	181 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	ARPC5L	Q9BPX5	153 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	TP53TG3	Q9ULZ0	132 aa		11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	EPPK1	P58107	5090 aa	Known RBP	11.73	□□□□□ -0.53
CCND3-222	ENST00000612455	TCRA	P04437	139 aa		11.72	□□□□□ -0.53
CCND3-222	ENST00000612455	AKR1C8P	Q5T2L2	129 aa		11.72	□□□□□ -0.53
CCND3-222	ENST00000612455		Q6ZTI0	123 aa		11.72	□□□□□ -0.53
CCND3-222	ENST00000612455	EPDR1	Q9UM22	224 aa		11.72	□□□□□ -0.53
CCND3-222	ENST00000612455	RPH3AL	Q9UNE2	315 aa		11.72	□□□□□ -0.53
CCND3-222	ENST00000612455	KLF12	Q9Y4X4	402 aa		11.72	□□□□□ -0.53
CCND3-222	ENST00000612455	DNAH10	Q8IVF4	4471 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	TRAV8-1	A0A0A6YYK1	113 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	GAGE12B	A1L429	117 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	GGTLC3	B5MD39	225 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	SPINK4	O60575	86 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	GAGE7	O76087	117 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	GAGE12F	P0CL80	117 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	GAGE12G	P0CL81	117 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	GAGE12I	P0CL82	117 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	RNF212	Q495C1	297 aa		11.71	□□□□□ -0.53
CCND3-222	ENST00000612455	MUC4	Q99102	2169 aa		11.71	□□□□□ -0.54
CCND3-222	ENST00000612455	IGLV2-11	P01706	119 aa		11.7	□□□□□ -0.54
CCND3-222	ENST00000612455	SEC11B	P0C7V7	166 aa		11.7	□□□□□ -0.54
CCND3-222	ENST00000612455	TDRG1	Q3Y452	100 aa		11.7	□□□□□ -0.54
CCND3-222	ENST00000612455		Q6ZNX1	250 aa		11.7	□□□□□ -0.54
CCND3-222	ENST00000612455	TMPRSS5	Q9H3S3	457 aa		11.7	□□□□□ -0.54
CCND3-222	ENST00000612455	NACA	E9PAV3	2078 aa		11.69	□□□□□ -0.54
CCND3-222	ENST00000612455	HOXA5	P20719	270 aa		11.69	□□□□□ -0.54
CCND3-222	ENST00000612455	LGALS9B	Q3B8N2	356 aa		11.69	□□□□□ -0.54
CCND3-222	ENST00000612455	TREM1	Q9NP99	234 aa		11.69	□□□□□ -0.54
CCND3-222	ENST00000612455	BCL2L11	O43521	198 aa		11.68	□□□□□ -0.54
CCND3-222	ENST00000612455	MUC21	Q5SSG8	566 aa		11.68	□□□□□ -0.54
CCND3-222	ENST00000612455	SGK494	Q96LW2	274 aa		11.68	□□□□□ -0.54
CCND3-222	ENST00000612455	NKX6-2	Q9C056	277 aa	Predicted RBP	11.68	□□□□□ -0.54
CCND3-222	ENST00000612455	PSG8	Q9UQ74	426 aa		11.68	□□□□□ -0.54
CCND3-222	ENST00000612455	TRAV21	A0A0B4J279	112 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	FBLL1	A6NHQ2	334 aa	Known RBP	11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	FAM74A7	A6NL05	159 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455		H3BNG1	76 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455		K7EQM0	130 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	FGF8	P55075	233 aa	Predicted RBP	11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	FAM159A	Q6UWV7	190 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	TMUB2	Q71RG4	321 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	CYB561D1	Q8N8Q1	229 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	TMEM75	Q8N9X5	138 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	MBD3L1	Q8WWY6	194 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	ATG101	Q9BSB4	218 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	MDFIC	Q9P1T7	246 aa		11.67	□□□□□ -0.54
CCND3-222	ENST00000612455	TRGV1	A0A0A0MS02	117 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	KANTR	A0A1W2PQU2	76 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	MAP1LC3B2	A6NCE7	125 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	UMAD1	C9J7I0	102 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	FHIT	P49789	147 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	FLI1	Q01543	452 aa	Predicted RBP	11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	ZNF415	Q09FC8	603 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	OR5I1	Q13606	314 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	IQCF2	Q8IXL9	164 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	TCTE3	Q8IZS6	198 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	SPX	Q9BT56	116 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	ZNF471	Q9BX82	626 aa	Predicted RBP	11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	MAP1LC3B	Q9GZQ8	125 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	FRAS1	Q86XX4	4008 aa		11.66	□□□□□ -0.54
CCND3-222	ENST00000612455	TRGV11	A0A075B6L2	103 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	TRGV2	A0A075B6R0	118 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	TRAV26-1	A0A087WT03	109 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455		F6UZH7	168 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	ZNF80	P51504	273 aa	Predicted RBP	11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	FAM3B	P58499	235 aa	Predicted RBP	11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	EIF5A	P63241	154 aa	Known RBP	11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	TMEM183B	Q1AE95	376 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	TMEM183A	Q8IXX5	376 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	RASL10A	Q92737	203 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	C8orf49	Q96NF6	230 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	NDFIP1	Q9BT67	221 aa		11.65	□□□□□ -0.54
CCND3-222	ENST00000612455	GNRH2	O43555	120 aa		11.64	□□□□□ -0.55
CCND3-222	ENST00000612455	NUDT3	O95989	172 aa		11.64	□□□□□ -0.55
CCND3-222	ENST00000612455	UBE2G2	P60604	165 aa		11.64	□□□□□ -0.55
CCND3-222	ENST00000612455	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.64	□□□□□ -0.55
CCND3-222	ENST00000612455	SAPCD1	Q5SSQ6	148 aa		11.64	□□□□□ -0.55
CCND3-222	ENST00000612455	STOML3	Q8TAV4	291 aa		11.64	□□□□□ -0.55
CCND3-222	ENST00000612455	LINC00479	Q96M42	142 aa		11.64	□□□□□ -0.55
CCND3-222	ENST00000612455	IGHV3-16	A0A0C4DH30	117 aa		11.63	□□□□□ -0.55
CCND3-222	ENST00000612455	DPPA3	Q6W0C5	159 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms