RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 TNFRSF19Q9NS68 423 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 HRNRQ86YZ3 2850 aaPredicted RBP8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 SMIM27A0A1W2PRY6 76 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 CRYGDP07320 174 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 FOXI1Q12951 378 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 PDPNQ86YL7 162 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 FXYD5Q96DB9 178 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 PGLYRP4Q96LB8 373 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 EDA2RQ9HAV5 297 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 FBN2P35556 2912 aa8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 SETD2Q9BYW2 2564 aaPredicted RBP8.47□□□□□ -1.05
PCDHGC3-202ENST00000611950 IZUMO1RA6ND01 250 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 NDUFB3O43676 98 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 LY6HO94772 140 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 HLA-DQA1P01909 254 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 C2orf91Q6ZV80 131 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 RAB37Q96AX2 223 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 KIR2DL4Q99706 377 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 MDFICQ9P1T7 246 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 LY96Q9Y6Y9 160 aa8.46□□□□□ -1.05
PCDHGC3-202ENST00000611950 CCDC168Q8NDH2 2452 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 TCRBV4S1A1TA0A5B7 111 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 RPL35AP18077 110 aaKnown RBP8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 DLX6P56179 175 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 LYZP61626 148 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMEM30BQ3MIR4 351 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 RPEQ96AT9 228 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 OTOGQ6ZRI0 2925 aa8.46□□□□□ -1.06
PCDHGC3-202ENST00000611950 ITPR3Q14573 2671 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 NPFFO15130 113 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 MT-ND6P03923 174 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 EXOC3-AS1Q8N2X6 119 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 PMCHL2Q9BQD1 86 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 TRAV9-1A0A075B6T8 112 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMEM178BH3BS89 294 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 PRRG2O14669 202 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 IGLV2-23P01705 113 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 ZNF415Q09FC8 603 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 GAGE2BQ13066 116 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 GAGE2EQ4V326 116 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 EBLN2Q6P2I7 272 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 OR8B3Q8NGG8 313 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 PRELID3AQ96N28 172 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 OR8B2Q96RD0 313 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 GAGE2DQ9UEU5 116 aa8.45□□□□□ -1.06
PCDHGC3-202ENST00000611950 TRBV9A0A0B4J1U6 114 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 MALP21145 153 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 LOXP28300 417 aaPredicted RBP8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 C4orf26Q17RF5 130 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 OR10J3Q5JRS4 329 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 PPP1R27Q86WC6 154 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 CIARTQ8N365 385 aaPredicted RBP8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 C3orf56Q8N813 242 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 ZNF502Q8TBZ5 544 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 FBXL15Q9H469 300 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 RBP4P02753 201 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 IGLC6P0CF74 106 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 PLGLAQ15195 96 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 C6orf226Q5I0X4 101 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMEM167AQ8TBQ9 72 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 ARL2-SNX15V9GYD0 113 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 KLF17Q5JT82 389 aaPredicted RBP8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 HRCT1Q6UXD1 115 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 C8orf31Q8N9H6 132 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 EPDR1Q9UM22 224 aa8.44□□□□□ -1.06
PCDHGC3-202ENST00000611950 VPS13CQ709C8 3753 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 SYS1-DBNDD2H3BUS1 97 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 SUB1P53999 127 aaKnown RBP eCLIP8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 VMA21Q3ZAQ7 101 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 hDV102S1A0JD36 115 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 APOMO95445 188 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 GTSF1Q8WW33 167 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 RASL11BQ9BPW5 248 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 HILPDAQ9Y5L2 63 aa8.43□□□□□ -1.06
PCDHGC3-202ENST00000611950 CSMD2Q7Z408 3487 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 IGHV3OR16-8A0A075B7F1 116 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 RPL27AP46776 148 aaKnown RBP8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 GFRALQ6UXV0 394 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 GOLT1AQ6ZVE7 132 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 ATP6V0E2Q8NHE4 81 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 Q9H3A6 140 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 FSTL3O95633 263 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 IGHV1-8P0DP01 117 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 Q6Q795 121 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 SSX8Q7RTT4 187 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 BPIFA4PQ86YQ2 179 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 RNASE6Q93091 150 aaKnown RBP8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 AJUBAQ96IF1 538 aa8.42□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMSB15BA0A087X1C1 80 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 TMEM89A2RUT3 159 aa8.41□□□□□ -1.06
PCDHGC3-202ENST00000611950 P01737 135 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms