RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 C9orf106Q8NAJ2 232 aa9.28□□□□□ -0.92
CTCFL-217ENST00000608425 PRADC1Q9BSG0 188 aa9.28□□□□□ -0.92
CTCFL-217ENST00000608425 MRPS12O15235 138 aaKnown RBP9.27□□□□□ -0.93
CTCFL-217ENST00000608425 TCF15Q12870 199 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 C4orf26Q17RF5 130 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 DEFB109BQ30KR1 87 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 IGFL3Q6UXB1 125 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 C17orf77Q96MU5 243 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 DMXL1Q9Y485 3027 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 CNEP1R1Q8N9A8 125 aa9.27□□□□□ -0.93
CTCFL-217ENST00000608425 ZNF292O60281 2723 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 HES1Q14469 280 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 C10orf55Q5SWW7 151 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 ASCL5Q7RTU5 278 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 FAM90A1Q86YD7 464 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 VKORC1Q9BQB6 163 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 TRGV11A0A075B6L2 103 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 J3KT08 172 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 GP9P14770 177 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 ICE1Q9Y2F5 2266 aa9.26□□□□□ -0.93
CTCFL-217ENST00000608425 CFC1BP0CG36 223 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 CFC1P0CG37 223 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 ZNF815PA8K554 130 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 IGLV1-44P01699 117 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 KLF14Q8TD94 323 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-217ENST00000608425 MBD3L4A6NDZ8 208 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-217ENST00000608425 MBD3L3A6NE82 208 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-217ENST00000608425 MBD3L5A6NJ08 208 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-217ENST00000608425 K7EM74 188 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 TIMM23O14925 209 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 ATP5LO75964 103 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 SAA2P0DJI9 122 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-217ENST00000608425 HRCT1Q6UXD1 115 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 MBD3L2Q8NHZ7 208 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-217ENST00000608425 KLK15Q9H2R5 256 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 DKK4Q9UBT3 224 aa9.25□□□□□ -0.93
CTCFL-217ENST00000608425 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 RNF185Q96GF1 192 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 RPUSD1Q9UJJ7 312 aaKnown RBP9.24□□□□□ -0.93
CTCFL-217ENST00000608425 CNOT1A5YKK6 2376 aaKnown RBP9.24□□□□□ -0.93
CTCFL-217ENST00000608425 IGHV3OR15-7A0A075B7D8 119 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 UPK2O00526 184 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 CECR9P0C854 216 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 APELAP0DMC3 54 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 SLC25A16P16260 332 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 KIR2DL5BQ8NHK3 375 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
CTCFL-217ENST00000608425 M0R3E3 92 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 IGHV4-39P01824 125 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 NBL1P41271 181 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 Q6ZS46 218 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 SMG1Q96Q15 3661 aaKnown RBP9.23□□□□□ -0.93
CTCFL-217ENST00000608425 KALRNO60229 2985 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 ZNF22P17026 224 aaPredicted RBP9.23□□□□□ -0.93
CTCFL-217ENST00000608425 LOXL3P58215 753 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 LRRC75A-AS1Q8N1F1 130 aa9.23□□□□□ -0.93
CTCFL-217ENST00000608425 ZNF71Q9NQZ8 489 aaPredicted RBP9.23□□□□□ -0.93
CTCFL-217ENST00000608425 PMVKQ15126 192 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 CD177Q8N6Q3 437 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 SPANXA1Q9NS26 97 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 BEX4Q9NWD9 120 aaPredicted RBP9.22□□□□□ -0.93
CTCFL-217ENST00000608425 INS-IGF2F8WCM5 200 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 OXTP01178 125 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
CTCFL-217ENST00000608425 WT1-ASQ06250 92 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 TMEM75Q8N9X5 138 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 CXXC4Q9H2H0 198 aa9.22□□□□□ -0.93
CTCFL-217ENST00000608425 EIF4EBP3O60516 100 aaPredicted RBP9.21□□□□□ -0.93
CTCFL-217ENST00000608425 C3orf22Q8N5N4 141 aa9.21□□□□□ -0.93
CTCFL-217ENST00000608425 M0R2P5 195 aa9.21□□□□□ -0.93
CTCFL-217ENST00000608425 SAA1P0DJI8 122 aaPredicted RBP9.21□□□□□ -0.93
CTCFL-217ENST00000608425 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.93
CTCFL-217ENST00000608425 SEM1Q6ZVN7 128 aa9.21□□□□□ -0.93
CTCFL-217ENST00000608425 MYOZ3Q8TDC0 251 aa9.21□□□□□ -0.93
CTCFL-217ENST00000608425 CSMD1Q96PZ7 3565 aa9.21□□□□□ -0.94
CTCFL-217ENST00000608425 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
CTCFL-217ENST00000608425 PRR7Q8TB68 274 aa9.21□□□□□ -0.94
CTCFL-217ENST00000608425 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 IGHV1-18A0A0C4DH31 117 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 LINC01619G3V211 115 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 LGALS9O00182 355 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 POM121L12Q8N7R1 296 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 TIMD4Q96H15 378 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 SLC25A15Q9Y619 301 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 TIMM8AO60220 97 aaPredicted RBP9.2□□□□□ -0.94
CTCFL-217ENST00000608425 SH2D1AO60880 128 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 CD3EP07766 207 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 OR4C13Q8NGP0 309 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 OTORQ9NRC9 128 aa9.2□□□□□ -0.94
CTCFL-217ENST00000608425 HCP5Q6MZN7 132 aa9.19□□□□□ -0.94
CTCFL-217ENST00000608425 ZNRF1Q8ND25 227 aa9.19□□□□□ -0.94
CTCFL-217ENST00000608425 MRPL20Q9BYC9 149 aaKnown RBP9.19□□□□□ -0.94
CTCFL-217ENST00000608425 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms