RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 TRAV26-2A0A0B4J265 109 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 IGHV3-35A0A0C4DH35 117 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 RBAKDNA6NC62 111 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 RRN3P1Q2M238 152 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 ETDBQ3ZM63 59 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 AMTNQ6UX39 209 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 HIST1H4GQ99525 98 aa11.76□□□□□ -0.53
LYSMD4-211ENST00000604213 PLNP26678 52 aa11.75□□□□□ -0.53
LYSMD4-211ENST00000604213 EFNA4P52798 201 aa11.75□□□□□ -0.53
LYSMD4-211ENST00000604213 ZNF502Q8TBZ5 544 aa11.75□□□□□ -0.53
LYSMD4-211ENST00000604213 AGRNO00468 2067 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 IGHV7-4-1A0A0J9YVY3 117 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 A0A1B0GWB2 263 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 ODF3BA8MYP8 253 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 SCGB2A1O75556 95 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 GAGE13Q4V321 117 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 AGPAT4-IT1Q9H0P7 198 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 NCBP2LA6PVI3 153 aaKnown RBP11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 CCDC144NLQ6NUI1 221 aa11.74□□□□□ -0.53
LYSMD4-211ENST00000604213 LINC01619G3V211 115 aa11.73□□□□□ -0.53
LYSMD4-211ENST00000604213 CD3EP07766 207 aa11.73□□□□□ -0.53
LYSMD4-211ENST00000604213 DMXL1Q9Y485 3027 aa11.73□□□□□ -0.53
LYSMD4-211ENST00000604213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 BUB3O43684 328 aa11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 CNOT1A5YKK6 2376 aaKnown RBP11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 H7C1H1 209 aa11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 MTURNQ8N3F0 131 aa11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 Q8N6K4 173 aa11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 ZFAND3Q9H8U3 227 aa11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 EP300Q09472 2414 aaPredicted RBP11.72□□□□□ -0.53
LYSMD4-211ENST00000604213 IGHV4-4A0A075B6R2 117 aa11.71□□□□□ -0.53
LYSMD4-211ENST00000604213 MYMXA0A1B0GTQ4 84 aa11.71□□□□□ -0.53
LYSMD4-211ENST00000604213 F8VRH5 84 aa11.71□□□□□ -0.53
LYSMD4-211ENST00000604213 BSNQ9UPA5 3926 aa11.71□□□□□ -0.53
LYSMD4-211ENST00000604213 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.53
LYSMD4-211ENST00000604213 INSL3P51460 131 aa11.71□□□□□ -0.54
LYSMD4-211ENST00000604213 SLC50A1Q9BRV3 221 aa11.71□□□□□ -0.54
LYSMD4-211ENST00000604213 MORN3Q6PF18 240 aaPredicted RBP11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 Q6ZQT7 251 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 ATP6V0BQ99437 205 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 IGHV7-81A0A0B4J1V7 117 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 TRAV8-2A0A0B4J237 113 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 IGHV3-66A0A0C4DH42 116 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 NDUFS8O00217 210 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 PRTN3P24158 256 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 APC2O95996 2303 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 OTOGLQ3ZCN5 2332 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 CACNA1HO95180 2353 aa11.7□□□□□ -0.54
LYSMD4-211ENST00000604213 POLEQ07864 2286 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 CSMD1Q96PZ7 3565 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 CLPSL1A2RUU4 121 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 M0R1W7 72 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 RAB9AP51151 201 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 SMIM2Q9BVW6 85 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 A0A1B0GV72 72 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 SPANXN1Q5VSR9 72 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 MRAP2Q96G30 205 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 MSRB2Q9Y3D2 182 aa11.69□□□□□ -0.54
LYSMD4-211ENST00000604213 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 TMEM78Q5T7P6 136 aa11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 Q8NA96 180 aa11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 LY6HO94772 140 aa11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 CLEC3BP05452 202 aa11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 EBI3Q14213 229 aa11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 C15orf32Q32M92 178 aa11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 CYSLTR1Q9Y271 337 aa11.68□□□□□ -0.54
LYSMD4-211ENST00000604213 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 VMO1Q7Z5L0 202 aa11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 TOMM6Q96B49 74 aa11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 SCGB3A1Q96QR1 104 aa11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
LYSMD4-211ENST00000604213 C9orf47Q6ZRZ4 202 aa11.66□□□□□ -0.54
LYSMD4-211ENST00000604213 LCNL1Q6ZST4 164 aa11.66□□□□□ -0.54
LYSMD4-211ENST00000604213 FAM110DQ8TAY7 271 aaPredicted RBP11.66□□□□□ -0.54
LYSMD4-211ENST00000604213 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
LYSMD4-211ENST00000604213 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
LYSMD4-211ENST00000604213 WNK2Q9Y3S1 2297 aa11.66□□□□□ -0.54
LYSMD4-211ENST00000604213 H3BVH4 76 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 Q8N9W7 124 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 PGPEP1Q9NXJ5 209 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 DCHS2Q6V1P9 2916 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 APOMO95445 188 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 SLC25A16P16260 332 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 C8orf86Q6ZUL3 223 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.54
LYSMD4-211ENST00000604213 RAXQ9Y2V3 346 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms