RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TVP23CQ96ET8 276 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 TXNDC17Q9BRA2 123 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 NDFIP1Q9BT67 221 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 TREM1Q9NP99 234 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 PSG8Q9UQ74 426 aa9.97□□□□□ -0.81
RNF40-212ENST00000602784 TEX48A0A1B0GUV7 120 aa9.96□□□□□ -0.82
RNF40-212ENST00000602784 TAGLN2P37802 199 aaKnown RBP9.96□□□□□ -0.82
RNF40-212ENST00000602784 PRR9Q5T870 116 aa9.96□□□□□ -0.82
RNF40-212ENST00000602784 Q6AWC8 147 aa9.96□□□□□ -0.82
RNF40-212ENST00000602784 LYPD6BQ8NI32 183 aa9.96□□□□□ -0.82
RNF40-212ENST00000602784 GNG13Q9P2W3 67 aa9.96□□□□□ -0.82
RNF40-212ENST00000602784 DNAH7Q8WXX0 4024 aa9.96□□□□□ -0.82
RNF40-212ENST00000602784 TRBV6-1A0A0K0K1D8 114 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 C11orf94C9JXX5 98 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 IFNA1P01562 189 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 SPART-AS1P0CW21 52 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 AZU1P20160 251 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 ATP5G3P48201 142 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 RNASE8Q8TDE3 154 aaKnown RBP9.95□□□□□ -0.82
RNF40-212ENST00000602784 TMEM263Q8WUH6 116 aaKnown RBP9.95□□□□□ -0.82
RNF40-212ENST00000602784 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 FMC1Q96HJ9 113 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 LINC00479Q96M42 142 aa9.95□□□□□ -0.82
RNF40-212ENST00000602784 TRAV34A0A0B4J273 112 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 PLAC8L1A1L4L8 177 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 CXorf65A6NEN9 183 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 PRM2P04554 102 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 S100A9P06702 114 aaKnown RBP9.94□□□□□ -0.82
RNF40-212ENST00000602784 HTN1P15515 57 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 ANXA2RQ3ZCQ2 193 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 TEX261Q6UWH6 196 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 PRNTQ86SH4 94 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 EIF4E3Q8N5X7 224 aaKnown RBP9.94□□□□□ -0.82
RNF40-212ENST00000602784 DKK2Q9UBU2 259 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
RNF40-212ENST00000602784 TRAV21A0A0B4J279 112 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 LYRM9A8MSI8 78 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 RGS13O14921 159 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 EMP1P54849 157 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 TMEM183BQ1AE95 376 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 SMUG1Q53HV7 270 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 ZNF680Q8NEM1 530 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 C2CD4CQ8TF44 421 aa9.93□□□□□ -0.82
RNF40-212ENST00000602784 IGHV1OR15-1A0A075B7D0 117 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 BCL2P10415 239 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 AKR1C3P42330 323 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 NANOS2P60321 138 aaKnown RBP9.92□□□□□ -0.82
RNF40-212ENST00000602784 UBE2G1P62253 170 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 MEF2BQ02080 365 aaPredicted RBP9.92□□□□□ -0.82
RNF40-212ENST00000602784 TDRG1Q3Y452 100 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 CASC10Q5T4H9 136 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 FAM222AQ5U5X8 452 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 Q86TA4 180 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 C11orf52Q96A22 123 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 VAX2Q9UIW0 290 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 CELA1Q9UNI1 258 aa9.92□□□□□ -0.82
RNF40-212ENST00000602784 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
RNF40-212ENST00000602784 SCO2A0A1W2PP80 73 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 CBY3A6NI87 242 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 PDE6DO43924 150 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 LTAP01374 205 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 C12orf74Q32Q52 190 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 FAM159AQ6UWV7 190 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 Q6ZQT7 251 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 C8orf49Q96NF6 230 aa9.91□□□□□ -0.82
RNF40-212ENST00000602784 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
RNF40-212ENST00000602784 GCGP01275 180 aa9.9□□□□□ -0.82
RNF40-212ENST00000602784 PFN1P07737 140 aaKnown RBP9.9□□□□□ -0.82
RNF40-212ENST00000602784 DAZ2Q13117 558 aaKnown RBP9.9□□□□□ -0.82
RNF40-212ENST00000602784 IBA57Q5T440 356 aaKnown RBP9.9□□□□□ -0.82
RNF40-212ENST00000602784 CEMP1Q6PRD7 247 aaPredicted RBP9.9□□□□□ -0.82
RNF40-212ENST00000602784 C11orf72Q8NBR9 251 aa9.9□□□□□ -0.82
RNF40-212ENST00000602784 PHLDA1Q8WV24 401 aaPredicted RBP9.9□□□□□ -0.82
RNF40-212ENST00000602784 SNURFLB1AK76 121 aa9.89□□□□□ -0.83
RNF40-212ENST00000602784 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
RNF40-212ENST00000602784 ZFAND6Q6FIF0 208 aa9.89□□□□□ -0.83
RNF40-212ENST00000602784 TMEM183AQ8IXX5 376 aa9.89□□□□□ -0.83
RNF40-212ENST00000602784 KCNS1Q96KK3 526 aa9.89□□□□□ -0.83
RNF40-212ENST00000602784 TP53TG3Q9ULZ0 132 aa9.89□□□□□ -0.83
RNF40-212ENST00000602784 TENM2Q9NT68 2774 aa9.89□□□□□ -0.83
RNF40-212ENST00000602784 TRGV11A0A075B6L2 103 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 RBFOX3A6NFN3 312 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 FABP5P3A8MUU1 101 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 NDUFS6O75380 124 aaKnown RBP9.88□□□□□ -0.83
RNF40-212ENST00000602784 TCL1AP56279 114 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 DAD1P61803 113 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 MUC21Q5SSG8 566 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 Q6ZTC4 211 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 MLST8Q9BVC4 326 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 NOP10Q9NPE3 64 aaKnown RBP9.88□□□□□ -0.83
RNF40-212ENST00000602784 GSN-AS1Q9NRJ2 163 aa9.88□□□□□ -0.83
RNF40-212ENST00000602784 CSMD3Q7Z407 3707 aa9.87□□□□□ -0.83
RNF40-212ENST00000602784 TRAV10A0A0B4J240 114 aa9.87□□□□□ -0.83
RNF40-212ENST00000602784 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
RNF40-212ENST00000602784 ZNF506Q5JVG8 444 aa9.87□□□□□ -0.83
RNF40-212ENST00000602784 BAGE2Q86Y30 109 aa9.87□□□□□ -0.83
RNF40-212ENST00000602784 ZC2HC1AQ96GY0 325 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms