RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 H3BNG1 76 aa18.13■□□□□ 0.49
PNKP-216ENST00000601816 ZNF266Q14584 549 aa18.13■□□□□ 0.49
PNKP-216ENST00000601816 CMTM2Q8TAZ6 248 aa18.13■□□□□ 0.49
PNKP-216ENST00000601816 NBDYA0A0U1RRE5 68 aa18.12■□□□□ 0.49
PNKP-216ENST00000601816 SPINK4O60575 86 aa18.12■□□□□ 0.49
PNKP-216ENST00000601816 FAM74A1Q5RGS3 127 aa18.12■□□□□ 0.49
PNKP-216ENST00000601816 OR10G4Q8NGN3 311 aa18.12■□□□□ 0.49
PNKP-216ENST00000601816 OR10G9Q8NGN4 311 aa18.12■□□□□ 0.49
PNKP-216ENST00000601816 OR10G7Q8NGN6 311 aa18.12■□□□□ 0.49
PNKP-216ENST00000601816 PGPA6NDG6 321 aa18.11■□□□□ 0.49
PNKP-216ENST00000601816 AQP10Q96PS8 301 aa18.11■□□□□ 0.49
PNKP-216ENST00000601816 RPH3ALQ9UNE2 315 aa18.11■□□□□ 0.49
PNKP-216ENST00000601816 LENEPQ9Y5L5 61 aa18.11■□□□□ 0.49
PNKP-216ENST00000601816 ZNF415Q09FC8 603 aa18.1■□□□□ 0.49
PNKP-216ENST00000601816 HSD17B11Q8NBQ5 300 aa18.1■□□□□ 0.49
PNKP-216ENST00000601816 MUC21Q5SSG8 566 aa18.09■□□□□ 0.49
PNKP-216ENST00000601816 TMED6Q8WW62 240 aa18.09■□□□□ 0.49
PNKP-216ENST00000601816 HERC2O95714 4834 aa18.08■□□□□ 0.49
PNKP-216ENST00000601816 HMGB3O15347 200 aaKnown RBP18.08■□□□□ 0.48
PNKP-216ENST00000601816 OR2G3Q8NGZ4 309 aa18.08■□□□□ 0.48
PNKP-216ENST00000601816 MRPL16Q9NX20 251 aaKnown RBP18.08■□□□□ 0.48
PNKP-216ENST00000601816 GIPP09681 153 aaPredicted RBP18.07■□□□□ 0.48
PNKP-216ENST00000601816 CDC34P49427 236 aaPredicted RBP18.07■□□□□ 0.48
PNKP-216ENST00000601816 Q6AWC8 147 aa18.07■□□□□ 0.48
PNKP-216ENST00000601816 GOLT1AQ6ZVE7 132 aa18.07■□□□□ 0.48
PNKP-216ENST00000601816 VSIG2Q96IQ7 327 aa18.07■□□□□ 0.48
PNKP-216ENST00000601816 ST6GAL2Q96JF0 529 aa18.07■□□□□ 0.48
PNKP-216ENST00000601816 PSMG3Q9BT73 122 aaPredicted RBP18.07■□□□□ 0.48
PNKP-216ENST00000601816 ARL14EPLP0DKL9 152 aa18.06■□□□□ 0.48
PNKP-216ENST00000601816 ARL6IP6Q8N6S5 226 aa18.06■□□□□ 0.48
PNKP-216ENST00000601816 ASB13Q8WXK3 278 aa18.06■□□□□ 0.48
PNKP-216ENST00000601816 PKHD1P08F94 4074 aa18.05■□□□□ 0.48
PNKP-216ENST00000601816 ATP6V0CP27449 155 aa18.05■□□□□ 0.48
PNKP-216ENST00000601816 ESRGQ1W209 222 aa18.05■□□□□ 0.48
PNKP-216ENST00000601816 Q5BKY6 102 aa18.05■□□□□ 0.48
PNKP-216ENST00000601816 C6orf223Q8N319 242 aa18.05■□□□□ 0.48
PNKP-216ENST00000601816 Q9H8V8 135 aa18.05■□□□□ 0.48
PNKP-216ENST00000601816 IGHV3-53P01767 116 aa18.04■□□□□ 0.48
PNKP-216ENST00000601816 FAM159AQ6UWV7 190 aa18.04■□□□□ 0.48
PNKP-216ENST00000601816 UPK3BQ9BT76 320 aa18.04■□□□□ 0.48
PNKP-216ENST00000601816 TRGV11A0A075B6L2 103 aa18.03■□□□□ 0.48
PNKP-216ENST00000601816 A0A096LPF7 62 aa18.03■□□□□ 0.48
PNKP-216ENST00000601816 MBP02144 154 aa18.03■□□□□ 0.48
PNKP-216ENST00000601816 STAG3L2P0CL84 134 aa18.03■□□□□ 0.48
PNKP-216ENST00000601816 STAG3L3P0CL85 134 aa18.03■□□□□ 0.48
PNKP-216ENST00000601816 MDFICQ9P1T7 246 aa18.03■□□□□ 0.48
PNKP-216ENST00000601816 MRPS16Q9Y3D3 137 aaKnown RBP18.03■□□□□ 0.48
PNKP-216ENST00000601816 PKD1P98161 4303 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 GNG5P63218 68 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 SERF2P84101 59 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 TMEM183BQ1AE95 376 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 TTC32Q5I0X7 151 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 TMEM183AQ8IXX5 376 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 INO80EQ8NBZ0 244 aaPredicted RBP18.02■□□□□ 0.48
PNKP-216ENST00000601816 RAB24Q969Q5 203 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 NAGKQ9UJ70 344 aa18.02■□□□□ 0.48
PNKP-216ENST00000601816 PAX4O43316 350 aa18.01■□□□□ 0.47
PNKP-216ENST00000601816 MUC4Q99102 2169 aa18■□□□□ 0.47
PNKP-216ENST00000601816 FXYD6-FXYD2A0A087WZ82 144 aa18■□□□□ 0.47
PNKP-216ENST00000601816 TRAV8-1A0A0A6YYK1 113 aa18■□□□□ 0.47
PNKP-216ENST00000601816 GCHFRP30047 84 aa18■□□□□ 0.47
PNKP-216ENST00000601816 SLAQ13239 276 aa18■□□□□ 0.47
PNKP-216ENST00000601816 SPXQ9BT56 116 aa18■□□□□ 0.47
PNKP-216ENST00000601816 SH3BGRL3Q9H299 93 aa18■□□□□ 0.47
PNKP-216ENST00000601816 TREM1Q9NP99 234 aa18■□□□□ 0.47
PNKP-216ENST00000601816 PRO0255Q9UI72 69 aa18■□□□□ 0.47
PNKP-216ENST00000601816 DNAH11Q96DT5 4516 aa18■□□□□ 0.47
PNKP-216ENST00000601816 DYNC1H1Q14204 4646 aaKnown RBP18■□□□□ 0.47
PNKP-216ENST00000601816 TRAV21A0A0B4J279 112 aa17.99■□□□□ 0.47
PNKP-216ENST00000601816 F6UZH7 168 aa17.99■□□□□ 0.47
PNKP-216ENST00000601816 ICOSQ9Y6W8 199 aa17.99■□□□□ 0.47
PNKP-216ENST00000601816 KIAA1109Q2LD37 5005 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 SERTM2A0A1B0GWG4 89 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 RNF222A6NCQ9 220 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 TNP2Q05952 138 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 TDRG1Q3Y452 100 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 C5orf17Q8NAS9 161 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 SUN5Q8TC36 379 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 TVP23CQ96ET8 276 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 ACTR3CQ9C0K3 210 aaPredicted RBP17.98■□□□□ 0.47
PNKP-216ENST00000601816 TNFSF18Q9UNG2 199 aa17.98■□□□□ 0.47
PNKP-216ENST00000601816 BORCS7-ASMTA0A0B4J1R7 106 aa17.97■□□□□ 0.47
PNKP-216ENST00000601816 FHL2Q14192 279 aa17.97■□□□□ 0.47
PNKP-216ENST00000601816 OR2T35Q8NGX2 323 aa17.97■□□□□ 0.47
PNKP-216ENST00000601816 C8orf49Q96NF6 230 aa17.97■□□□□ 0.47
PNKP-216ENST00000601816 NDFIP1Q9BT67 221 aa17.97■□□□□ 0.47
PNKP-216ENST00000601816 TMEM167BQ9NRX6 74 aa17.97■□□□□ 0.47
PNKP-216ENST00000601816 HHLA3Q9XRX5 114 aa17.97■□□□□ 0.47
PNKP-216ENST00000601816 CXorf1O96002 111 aa17.96■□□□□ 0.47
PNKP-216ENST00000601816 MED14OSP0DP75 135 aa17.96■□□□□ 0.47
PNKP-216ENST00000601816 CRYBA4P53673 196 aa17.96■□□□□ 0.47
PNKP-216ENST00000601816 RGS21Q2M5E4 152 aa17.96■□□□□ 0.47
PNKP-216ENST00000601816 RPL7L1Q6DKI1 246 aaKnown RBP17.96■□□□□ 0.47
PNKP-216ENST00000601816 RASL10AQ92737 203 aa17.96■□□□□ 0.47
PNKP-216ENST00000601816 KRTAP1-5Q9BYS1 174 aa17.96■□□□□ 0.47
PNKP-216ENST00000601816 TRGV4A0A0C4DH28 118 aa17.95■□□□□ 0.46
PNKP-216ENST00000601816 K7EQM0 130 aa17.95■□□□□ 0.46
PNKP-216ENST00000601816 TCRAP04437 139 aa17.95■□□□□ 0.46
PNKP-216ENST00000601816 SGK494Q96LW2 274 aa17.95■□□□□ 0.46
PNKP-216ENST00000601816 A0A1W2PPQ1 181 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms