RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 FAM231CP0DMU5 169 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 GNG5P63218 68 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 ZNF345Q14585 488 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
IRF3-230ENST00000601809 KCNRGQ8N5I3 272 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 POM121L12Q8N7R1 296 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 C18orf15Q96N68 181 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
IRF3-230ENST00000601809 GSN-AS1Q9NRJ2 163 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 IGHV1OR15-1A0A075B7D0 117 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 TRAV8-1A0A0A6YYK1 113 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 GGTLC3B5MD39 225 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 CXorf1O96002 111 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 TCL1AP56279 114 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 FAM74A1Q5RGS3 127 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 Q6ZTI0 123 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 GOLT1AQ6ZVE7 132 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 KLF12Q9Y4X4 402 aa12.25□□□□□ -0.45
IRF3-230ENST00000601809 SPINK4O60575 86 aa12.24□□□□□ -0.45
IRF3-230ENST00000601809 HOXA5P20719 270 aa12.24□□□□□ -0.45
IRF3-230ENST00000601809 C15orf53Q8NAA6 179 aa12.24□□□□□ -0.45
IRF3-230ENST00000601809 CMTM2Q8TAZ6 248 aa12.24□□□□□ -0.45
IRF3-230ENST00000601809 TMEM167BQ9NRX6 74 aa12.24□□□□□ -0.45
IRF3-230ENST00000601809 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 F5H768 121 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 GAGE7O76087 117 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 IGLV2-11P01706 119 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 TCRAP04437 139 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 C5orf17Q8NAS9 161 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 RPH3ALQ9UNE2 315 aa12.23□□□□□ -0.45
IRF3-230ENST00000601809 RGS13O14921 159 aa12.22□□□□□ -0.45
IRF3-230ENST00000601809 TDRG1Q3Y452 100 aa12.22□□□□□ -0.45
IRF3-230ENST00000601809 RNF212Q495C1 297 aa12.22□□□□□ -0.45
IRF3-230ENST00000601809 TMPRSS5Q9H3S3 457 aa12.22□□□□□ -0.45
IRF3-230ENST00000601809 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
IRF3-230ENST00000601809 A0A1W2PRE2 83 aa12.21□□□□□ -0.45
IRF3-230ENST00000601809 ARPC5LQ9BPX5 153 aa12.21□□□□□ -0.45
IRF3-230ENST00000601809 EPDR1Q9UM22 224 aa12.21□□□□□ -0.45
IRF3-230ENST00000601809 MUC4Q99102 2169 aa12.2□□□□□ -0.46
IRF3-230ENST00000601809 SUMO1P63165 101 aaKnown RBP12.2□□□□□ -0.46
IRF3-230ENST00000601809 MDFICQ9P1T7 246 aa12.2□□□□□ -0.46
IRF3-230ENST00000601809 LGALS9BQ3B8N2 356 aa12.19□□□□□ -0.46
IRF3-230ENST00000601809 MUC21Q5SSG8 566 aa12.19□□□□□ -0.46
IRF3-230ENST00000601809 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
IRF3-230ENST00000601809 SGK494Q96LW2 274 aa12.19□□□□□ -0.46
IRF3-230ENST00000601809 PKD1P98161 4303 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 A0A0D9SG52 128 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 F6UZH7 168 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 H3BNG1 76 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 FHITP49789 147 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
IRF3-230ENST00000601809 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
IRF3-230ENST00000601809 Q6ZNX1 250 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 Q6ZR54 194 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 TREM1Q9NP99 234 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 PSG8Q9UQ74 426 aa12.18□□□□□ -0.46
IRF3-230ENST00000601809 TRAV26-1A0A087WT03 109 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 TRGV1A0A0A0MS02 117 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 FAM74A7A6NL05 159 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 BCL2L11O43521 198 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 SEC11BP0C7V7 166 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 CYB561D1Q8N8Q1 229 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 TMEM75Q8N9X5 138 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 C8orf49Q96NF6 230 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 ATG101Q9BSB4 218 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
IRF3-230ENST00000601809 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
IRF3-230ENST00000601809 TRAV21A0A0B4J279 112 aa12.16□□□□□ -0.46
IRF3-230ENST00000601809 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
IRF3-230ENST00000601809 FLI1Q01543 452 aaPredicted RBP12.16□□□□□ -0.46
IRF3-230ENST00000601809 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
IRF3-230ENST00000601809 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 NUDT3O95989 172 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
IRF3-230ENST00000601809 OR5I1Q13606 314 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 TMEM183BQ1AE95 376 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 FAM159AQ6UWV7 190 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 TCTE3Q8IZS6 198 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 ZNRF2Q8NHG8 242 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 LINC00588Q9Y4M8 146 aa12.15□□□□□ -0.46
IRF3-230ENST00000601809 TRGV11A0A075B6L2 103 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 A0A0J9YY99 117 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 GNRH2O43555 120 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 TYMSP04818 313 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 UBE2G2P60604 165 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
IRF3-230ENST00000601809 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms