RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 IGHV3-35A0A0C4DH35 117 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 FAM181BA6NEQ2 426 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 A8MZ25 164 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 NDUFA7O95182 113 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 SEM1Q6ZVN7 128 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 CHCHD1Q96BP2 118 aaKnown RBP8.29□□□□□ -1.08
LIG1-220ENST00000601091 MRPL53Q96EL3 112 aaKnown RBP8.29□□□□□ -1.08
LIG1-220ENST00000601091 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 TP53TG3Q9ULZ0 132 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 KMT2EQ8IZD2 1858 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 NAV3Q8IVL0 2385 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 RNF5Q99942 180 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 VKORC1Q9BQB6 163 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 BUB1B-PAK6H3BSN5 160 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 CGB3P0DN86 165 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 CGB7P0DN87 165 aa8.29□□□□□ -1.08
LIG1-220ENST00000601091 LOXP28300 417 aaPredicted RBP8.28□□□□□ -1.08
LIG1-220ENST00000601091 PMVKQ15126 192 aa8.28□□□□□ -1.08
LIG1-220ENST00000601091 TRPT1Q86TN4 253 aaKnown RBP8.28□□□□□ -1.08
LIG1-220ENST00000601091 ATMQ13315 3056 aa8.28□□□□□ -1.08
LIG1-220ENST00000601091 OTOGLQ3ZCN5 2332 aa8.28□□□□□ -1.08
LIG1-220ENST00000601091 E7EQL1 145 aa8.28□□□□□ -1.08
LIG1-220ENST00000601091 MRPL55Q7Z7F7 128 aaKnown RBP8.28□□□□□ -1.08
LIG1-220ENST00000601091 GTSCR1Q86UQ5 136 aa8.28□□□□□ -1.08
LIG1-220ENST00000601091 DMXL2Q8TDJ6 3036 aa8.28□□□□□ -1.08
LIG1-220ENST00000601091 IGKV1OR2-108A0A075B7D4 117 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 ZNF672Q499Z4 452 aaPredicted RBP8.27□□□□□ -1.09
LIG1-220ENST00000601091 DGAT2L7PQ6IED9 249 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 TMEM86BQ8N661 226 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 C11orf44Q8N8P7 122 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 ZNF138P52744 262 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 TMEM190Q8WZ59 177 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 FXYD5Q96DB9 178 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 TPSG1Q9NRR2 321 aa8.27□□□□□ -1.09
LIG1-220ENST00000601091 NHP2Q9NX24 153 aaKnown RBP8.27□□□□□ -1.09
LIG1-220ENST00000601091 HCFC1P51610 2035 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 H3BS24 57 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 IGHV3-23P01764 117 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 NMUP48645 174 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 SP5Q6BEB4 398 aaPredicted RBP8.26□□□□□ -1.09
LIG1-220ENST00000601091 LINC00336Q6ZUF6 198 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 SPACA3Q8IXA5 215 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 FAM168AQ92567 244 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 A1L4Q6 167 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
LIG1-220ENST00000601091 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 TRAV4A0A0B4J268 109 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 SPANXN1Q5VSR9 72 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 SFTA2Q6UW10 78 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 U3KQE9 123 aa8.26□□□□□ -1.09
LIG1-220ENST00000601091 H7C1H1 209 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 CNTFRP26992 372 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 LINC00310P59036 64 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 METTL26Q96S19 204 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 NCKAP5O14513 1909 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 PFN2P35080 140 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 Q96MF0 132 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 KAAG1Q9UBP8 84 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 MORN5Q5VZ52 161 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 C8orf31Q8N9H6 132 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 MYOZ3Q8TDC0 251 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 GFRA4Q9GZZ7 299 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 ZNF492Q9P255 531 aa8.25□□□□□ -1.09
LIG1-220ENST00000601091 IGHV3OR16-8A0A075B7F1 116 aa8.24□□□□□ -1.09
LIG1-220ENST00000601091 C1orf229Q6ZS94 237 aaPredicted RBP8.24□□□□□ -1.09
LIG1-220ENST00000601091 FAM167A-AS1Q96KT0 104 aa8.24□□□□□ -1.09
LIG1-220ENST00000601091 DLX1P56177 255 aa8.24□□□□□ -1.09
LIG1-220ENST00000601091 Q86TA4 180 aa8.24□□□□□ -1.09
LIG1-220ENST00000601091 ZNF414Q96IQ9 312 aa8.24□□□□□ -1.09
LIG1-220ENST00000601091 KIR3DL3Q8N743 410 aa8.24□□□□□ -1.09
LIG1-220ENST00000601091 LOC107984156A0A0G2JMH3 177 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 K7EM74 188 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 ARL17AQ8IVW1 177 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 PATE2Q6UY27 113 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 ZNRF2Q8NHG8 242 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 PPDPFLQ8WWR9 84 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 CTSZQ9UBR2 303 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 IGHV3OR16-13A0A075B7E8 117 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 IGHV3-74A0A0B4J1X5 117 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 A0A1B0GX51 115 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 Q8N7P7 452 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 ZNF502Q8TBZ5 544 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 SHANK2-AS3Q9BTD1 123 aa8.23□□□□□ -1.09
LIG1-220ENST00000601091 K7ERJ3 54 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 M0R3E3 92 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 TRACP01848 142 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 ZNF688P0C7X2 276 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 HERVK_113P61574 105 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 KLRB1Q12918 225 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 Q8N976 141 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 AJUBAQ96IF1 538 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 LINC00574Q9H8X3 128 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 INS-IGF2F8WCM5 200 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 FXYD7P58549 80 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms