RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
ZNF548-211ENST00000600927 RPL11P62913 178 aaKnown RBP8.64□□□□□ -1.03
ZNF548-211ENST00000600927 Q6AWC8 147 aa8.64□□□□□ -1.03
ZNF548-211ENST00000600927 ATP5L2Q7Z4Y8 100 aa8.64□□□□□ -1.03
ZNF548-211ENST00000600927 OR10J6PQ8NGY7 276 aa8.64□□□□□ -1.03
ZNF548-211ENST00000600927 SGK494Q96LW2 274 aa8.64□□□□□ -1.03
ZNF548-211ENST00000600927 AGPAT4-IT1Q9H0P7 198 aa8.64□□□□□ -1.03
ZNF548-211ENST00000600927 FABP5P3A8MUU1 101 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 K7EQG2 157 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 MT-ND6P03923 174 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 HLA-DMBP28068 263 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 SLURP1P55000 103 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 FAM162BQ5T6X4 162 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 C9orf66Q5T8R8 295 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 PRR27Q6MZM9 219 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 NHLRC2Q8NBF2 726 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 ZNF738Q8NE65 137 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 DLX4Q92988 240 aaPredicted RBP8.63□□□□□ -1.03
ZNF548-211ENST00000600927 ZC2HC1AQ96GY0 325 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 ODF3Q96PU9 254 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 VGLL1Q99990 258 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 GNB1LQ9BYB4 327 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 MS4A6AQ9H2W1 248 aa8.63□□□□□ -1.03
ZNF548-211ENST00000600927 TMA7Q9Y2S6 64 aaKnown RBP8.63□□□□□ -1.03
ZNF548-211ENST00000600927 PRAC2D3DTV9 90 aa8.62□□□□□ -1.03
ZNF548-211ENST00000600927 CSN3P07498 182 aa8.62□□□□□ -1.03
ZNF548-211ENST00000600927 CRIP1P50238 77 aa8.62□□□□□ -1.03
ZNF548-211ENST00000600927 HIST1H1AQ02539 215 aaPredicted RBP8.62□□□□□ -1.03
ZNF548-211ENST00000600927 LINC00322Q6ZN03 302 aaPredicted RBP8.62□□□□□ -1.03
ZNF548-211ENST00000600927 APRG1Q8IVJ8 170 aa8.62□□□□□ -1.03
ZNF548-211ENST00000600927 RNF182Q8N6D2 247 aa8.62□□□□□ -1.03
ZNF548-211ENST00000600927 OR8A1Q8NGG7 326 aa8.62□□□□□ -1.03
ZNF548-211ENST00000600927 A0A1B0GW15 77 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 INSL3P51460 131 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 CMC4P56277 68 aaPredicted RBP8.61□□□□□ -1.03
ZNF548-211ENST00000600927 IGFL4Q6B9Z1 124 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 ADAMTSL5Q6ZMM2 481 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 RBPMS2Q6ZRY4 209 aaKnown RBP8.61□□□□□ -1.03
ZNF548-211ENST00000600927 OR2K2Q8NGT1 345 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 MRAPQ8TCY5 172 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 C20orf173Q96LM9 149 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 FAM19A4Q96LR4 140 aa8.61□□□□□ -1.03
ZNF548-211ENST00000600927 PHOX2AO14813 284 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 DUSP14O95147 198 aaKnown RBP8.6□□□□□ -1.03
ZNF548-211ENST00000600927 TRGC2P03986 189 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 CRISP2P16562 243 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 DEFB114Q30KQ6 69 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 NUP35Q8NFH5 326 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 OR2D3Q8NGH3 330 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 C8orf49Q96NF6 230 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 NEU1Q99519 415 aa8.6□□□□□ -1.03
ZNF548-211ENST00000600927 ZMAT5Q9UDW3 170 aaKnown RBP8.6□□□□□ -1.03
ZNF548-211ENST00000600927 TMEM189A5PLL7 270 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 HLA-DQA1P01909 254 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 S100A8P05109 93 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 ERCC8Q13216 396 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 ACTL10Q5JWF8 245 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 SPAG8Q99932 426 aaPredicted RBP8.59□□□□□ -1.03
ZNF548-211ENST00000600927 TRAPPC1Q9Y5R8 145 aa8.59□□□□□ -1.03
ZNF548-211ENST00000600927 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
ZNF548-211ENST00000600927 SH2D1AO60880 128 aa8.58□□□□□ -1.04
ZNF548-211ENST00000600927 S100A6P06703 90 aa8.58□□□□□ -1.04
ZNF548-211ENST00000600927 EBLN2Q6P2I7 272 aa8.58□□□□□ -1.04
ZNF548-211ENST00000600927 FOXI2Q6ZQN5 318 aa8.58□□□□□ -1.04
ZNF548-211ENST00000600927 DYNLRB2Q8TF09 96 aa8.58□□□□□ -1.04
ZNF548-211ENST00000600927 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
ZNF548-211ENST00000600927 TRAV21A0A0B4J279 112 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 A0A0J9YX75 114 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 A0A1B0GXF2 115 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 OR4C46A6NHA9 309 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 A8MTW9 85 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 F2Z2F3 143 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 SAP30O75446 220 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 EDN2P20800 178 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 TSPOP30536 169 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 RIGQ13278 110 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 FAM110AQ9BQ89 295 aa8.57□□□□□ -1.04
ZNF548-211ENST00000600927 ZNF256Q9Y2P7 627 aaPredicted RBP8.57□□□□□ -1.04
ZNF548-211ENST00000600927 A0A1B0GUT8 65 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 LOC105371267A0A1B0GV96 52 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 C5orf52A6NGY3 159 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST1H2BKO60814 126 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
ZNF548-211ENST00000600927 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST1H2BJP06899 126 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 TRGC1P0CF51 173 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST1H2BOP23527 126 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST1H2BBP33778 126 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 LEPP41159 167 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 ZNF80P51504 273 aaPredicted RBP8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST1H2BDP58876 126 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST1H2BCP62807 126 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HBBP68871 147 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST2H2BEQ16778 126 aa8.56□□□□□ -1.04
ZNF548-211ENST00000600927 COA6Q5JTJ3 125 aaKnown RBP8.56□□□□□ -1.04
ZNF548-211ENST00000600927 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms