RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 RNF24Q9Y225 148 aa11.58□□□□□ -0.56
VRK3-218ENST00000600031 IGHV4OR15-8A0A075B7B6 117 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 A0A087WW49 117 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 NDUFA7O95182 113 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 SMAD5-AS1Q9Y6J3 95 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 SETD2Q9BYW2 2564 aaPredicted RBP11.57□□□□□ -0.56
VRK3-218ENST00000600031 RPL7P18124 248 aaKnown RBP11.57□□□□□ -0.56
VRK3-218ENST00000600031 S100A7P31151 101 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 HNRNPA3P51991 378 aaKnown RBP11.57□□□□□ -0.56
VRK3-218ENST00000600031 BATFQ16520 125 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 Q6ZN92 141 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 Q86TA4 180 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 GPHB5Q86YW7 130 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
VRK3-218ENST00000600031 CHCHD1Q96BP2 118 aaKnown RBP11.57□□□□□ -0.56
VRK3-218ENST00000600031 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 HAX1O00165 279 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 KHDC1LQ5JSQ8 128 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 C11orf44Q8N8P7 122 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 TRAV9-2A0A087WT02 112 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 C2orf70A6NJV1 201 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 CD28P10747 220 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 DEFB136Q30KP8 78 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 TM4SF20Q53R12 229 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 DMRTA1Q5VZB9 504 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 PGLYRP4Q96LB8 373 aa11.56□□□□□ -0.56
VRK3-218ENST00000600031 EXOC3-AS1Q8N2X6 119 aa11.55□□□□□ -0.56
VRK3-218ENST00000600031 C4orf3Q8WVX3 66 aa11.55□□□□□ -0.56
VRK3-218ENST00000600031 GOLT1BQ9Y3E0 138 aa11.55□□□□□ -0.56
VRK3-218ENST00000600031 EDN2P20800 178 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 FOXA3P55318 350 aaPredicted RBP11.54□□□□□ -0.56
VRK3-218ENST00000600031 LCN12Q6JVE5 192 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 C16orf54Q6UWD8 224 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 LYPD1Q8N2G4 141 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 URB1-AS1Q96HZ7 61 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 NDFIP1Q9BT67 221 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 LAMTOR2Q9Y2Q5 125 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 MRPS16Q9Y3D3 137 aaKnown RBP11.54□□□□□ -0.56
VRK3-218ENST00000600031 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
VRK3-218ENST00000600031 CHEK1O14757 476 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 IGLV2-11P01706 119 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 LINC00614P0C842 121 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 HOXD3P31249 432 aaPredicted RBP11.53□□□□□ -0.56
VRK3-218ENST00000600031 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 DAZ1Q9NQZ3 744 aaKnown RBP11.53□□□□□ -0.56
VRK3-218ENST00000600031 ZFP30Q9Y2G7 519 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 K7EMT4 169 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 K7EQM0 130 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 SYNJ2BPP57105 145 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 PROK1P58294 105 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 GOLT1AQ6ZVE7 132 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 PRNTQ86SH4 94 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 ATOH7Q8N100 152 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 TMEM75Q8N9X5 138 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
VRK3-218ENST00000600031 C2CD3Q4AC94 2353 aa11.52□□□□□ -0.57
VRK3-218ENST00000600031 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
VRK3-218ENST00000600031 IGHV7-4-1A0A0J9YVY3 117 aa11.52□□□□□ -0.57
VRK3-218ENST00000600031 ZNF785A8K8V0 405 aa11.52□□□□□ -0.57
VRK3-218ENST00000600031 CRXO43186 299 aaPredicted RBP11.52□□□□□ -0.57
VRK3-218ENST00000600031 SLURP1P55000 103 aa11.52□□□□□ -0.57
VRK3-218ENST00000600031 PDE6HQ13956 83 aa11.52□□□□□ -0.57
VRK3-218ENST00000600031 C8orf86Q6ZUL3 223 aa11.52□□□□□ -0.57
VRK3-218ENST00000600031 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
VRK3-218ENST00000600031 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
VRK3-218ENST00000600031 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 TSPOP30536 169 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 A0A087X0K7 114 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 TRAV8-1A0A0A6YYK1 113 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 A0A1W2PRX2 142 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 TMEM213A2RRL7 107 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 OR1N2Q8NGR9 330 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 WFDC12Q8WWY7 111 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 SMPXQ9UHP9 88 aa11.51□□□□□ -0.57
VRK3-218ENST00000600031 NIPBLQ6KC79 2804 aaeCLIP11.51□□□□□ -0.57
VRK3-218ENST00000600031 A0A1B0GW15 77 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 LINC01619G3V211 115 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 LGALS9O00182 355 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
VRK3-218ENST00000600031 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 GATD1Q8NB37 220 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 SELENOKQ9Y6D0 94 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 IGHV1-24A0A0C4DH33 117 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 LEPROTL1O95214 131 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 IGLL1P15814 213 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 RIGQ13278 110 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 MAJINQ3KP22 176 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 DPF1Q92782 380 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
VRK3-218ENST00000600031 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
VRK3-218ENST00000600031 M0R3E3 92 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms