RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 NDUFS7O75251 213 aa9.41□□□□□ -0.9
SCN8A-208ENST00000599343 ANKRD29Q8N6D5 301 aa9.41□□□□□ -0.9
SCN8A-208ENST00000599343 F8VRH5 84 aa9.41□□□□□ -0.9
SCN8A-208ENST00000599343 NDUFA4O00483 81 aa9.41□□□□□ -0.9
SCN8A-208ENST00000599343 DOCK6Q96HP0 2047 aa9.4□□□□□ -0.9
SCN8A-208ENST00000599343 FAM231DQ6ZW35 169 aa9.4□□□□□ -0.9
SCN8A-208ENST00000599343 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.9
SCN8A-208ENST00000599343 HLA-DMBP28068 263 aa9.4□□□□□ -0.9
SCN8A-208ENST00000599343 LMO1P25800 156 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 ZNF134P52741 427 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 HERVK_113P63121 156 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 FXYD5Q96DB9 178 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 IGHV4-4A0A075B6R2 117 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 CFHR4Q92496 578 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 C17orf77Q96MU5 243 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 TMEM14CQ9P0S9 112 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 MYO7BQ6PIF6 2116 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 SIPA1L1O43166 1804 aa9.4□□□□□ -0.91
SCN8A-208ENST00000599343 LOXP28300 417 aaPredicted RBP9.39□□□□□ -0.91
SCN8A-208ENST00000599343 XCL1P47992 114 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 SHISA9B4DS77 424 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 SPRY2O43597 315 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 WISP1O95388 367 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 C12orf74Q32Q52 190 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 VOPP1Q96AW1 172 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 CREBBPQ92793 2442 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 LHBP01229 141 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
SCN8A-208ENST00000599343 Q8TCH9 128 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 XIRP1Q702N8 1843 aaKnown RBP9.39□□□□□ -0.91
SCN8A-208ENST00000599343 PHF3Q92576 2039 aaKnown RBP9.39□□□□□ -0.91
SCN8A-208ENST00000599343 A0A0J9YY99 117 aa9.39□□□□□ -0.91
SCN8A-208ENST00000599343 PRB2P02812 416 aaPredicted RBP9.39□□□□□ -0.91
SCN8A-208ENST00000599343 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
SCN8A-208ENST00000599343 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
SCN8A-208ENST00000599343 ZNF503-AS2A6NEH8 195 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 GNRH2O43555 120 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 NBL1P41271 181 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 Q6ZVH6 145 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 KLF2Q9Y5W3 355 aaPredicted RBP9.38□□□□□ -0.91
SCN8A-208ENST00000599343 F6UB75 175 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 ARTNQ5T4W7 220 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 SPTAN1Q13813 2472 aaKnown RBP9.38□□□□□ -0.91
SCN8A-208ENST00000599343 K7EN84 100 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 APOC4P55056 127 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 C5orf47Q569G3 176 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 PTPRDP23468 1912 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 Q6ZQT7 251 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 SCN5AQ14524 2016 aa9.38□□□□□ -0.91
SCN8A-208ENST00000599343 IGKV1OR2-108A0A075B7D4 117 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 GATA3P23771 443 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 IGHV7-4-1A0A0J9YVY3 117 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 CCL25O15444 150 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 IGHV2-5P01817 119 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 NOP10Q9NPE3 64 aaKnown RBP9.37□□□□□ -0.91
SCN8A-208ENST00000599343 FOXE3Q13461 319 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 CR1LQ2VPA4 569 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 DOCK10Q96BY6 2186 aa9.37□□□□□ -0.91
SCN8A-208ENST00000599343 C1orf147Q96MC9 270 aaPredicted RBP9.36□□□□□ -0.91
SCN8A-208ENST00000599343 DOCK11Q5JSL3 2073 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 HEATR1Q9H583 2144 aaKnown RBP9.36□□□□□ -0.91
SCN8A-208ENST00000599343 NOTCH3Q9UM47 2321 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 NBASA2RRP1 2371 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 C15orf65H3BRN8 121 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 CFPP27918 469 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 UBE2BP63146 152 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 CLPSL1A2RUU4 121 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 BAALC-AS2P0C853 105 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 DYNAPQ8N1N2 210 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 PYGO2Q9BRQ0 406 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 IGLC1P0CG04 106 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
SCN8A-208ENST00000599343 SS18L2Q9UHA2 77 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 DOCK9Q9BZ29 2069 aa9.36□□□□□ -0.91
SCN8A-208ENST00000599343 C22orf46C9J442 243 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 Q9H8V8 135 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 IGFBPL1Q8WX77 278 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 CACNA1HO95180 2353 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 LTAP01374 205 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 C10orf91Q5T1B1 145 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 BOD1L2Q8IYS8 172 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 C20orf78Q9BR46 151 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 BRWD3Q6RI45 1802 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 RMI2Q96E14 147 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 CACNA1BQ00975 2339 aa9.35□□□□□ -0.91
SCN8A-208ENST00000599343 GATA1P15976 413 aaPredicted RBP9.35□□□□□ -0.91
SCN8A-208ENST00000599343 IGHV4-28A0A0C4DH34 117 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 CFC1BP0CG36 223 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 CFC1P0CG37 223 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 K7EM74 188 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 CDPF1Q6NVV7 123 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 Q9HAA7 133 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 U3KQE9 123 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 PKDREJQ9NTG1 2253 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms