RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ODF3Q96PU9 254 aa10.95□□□□□ -0.66
TRIM28-207ENST00000597136 OVOL2Q9BRP0 275 aa10.95□□□□□ -0.66
TRIM28-207ENST00000597136 U3KQK5 164 aa10.95□□□□□ -0.66
TRIM28-207ENST00000597136 TRBV7-9A0A0J9YWB2 115 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 SAPCD1Q5SSQ6 148 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 SPATA25Q9BR10 227 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 IGLV2-8P01709 118 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 ADCYAP1P18509 176 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 TMEM183AQ8IXX5 376 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 ZFAND2AQ8N6M9 145 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 NHLRC2Q8NBF2 726 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 C8orf49Q96NF6 230 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 NDFIP1Q9BT67 221 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 MLST8Q9BVC4 326 aa10.94□□□□□ -0.66
TRIM28-207ENST00000597136 F8W036 122 aa10.93□□□□□ -0.66
TRIM28-207ENST00000597136 M0R2Z0 102 aa10.93□□□□□ -0.66
TRIM28-207ENST00000597136 CA1P00915 261 aaPredicted RBP10.93□□□□□ -0.66
TRIM28-207ENST00000597136 CRISP2P16562 243 aa10.93□□□□□ -0.66
TRIM28-207ENST00000597136 FXYD7P58549 80 aa10.93□□□□□ -0.66
TRIM28-207ENST00000597136 TMEM241Q24JQ0 296 aa10.93□□□□□ -0.66
TRIM28-207ENST00000597136 COX8CQ7Z4L0 72 aa10.93□□□□□ -0.66
TRIM28-207ENST00000597136 SEC11CQ9BY50 192 aa10.93□□□□□ -0.66
TRIM28-207ENST00000597136 UBE2CO00762 179 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 TSPOP30536 169 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 LEPP41159 167 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 SPINK13Q1W4C9 94 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 Q6ZWC4 215 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 OCC1Q8TAD7 63 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 RNF183Q96D59 192 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 SMIM12Q96EX1 92 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 NIPSNAP3BQ9BS92 247 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 NAT8Q9UHE5 227 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 LY96Q9Y6Y9 160 aa10.92□□□□□ -0.66
TRIM28-207ENST00000597136 KLLNB2CW77 178 aa10.91□□□□□ -0.66
TRIM28-207ENST00000597136 SPRY2O43597 315 aa10.91□□□□□ -0.66
TRIM28-207ENST00000597136 CDKN1BP46527 198 aa10.91□□□□□ -0.66
TRIM28-207ENST00000597136 KIR3DS1Q14943 382 aa10.91□□□□□ -0.66
TRIM28-207ENST00000597136 C10orf91Q5T1B1 145 aa10.91□□□□□ -0.66
TRIM28-207ENST00000597136 ZC2HC1AQ96GY0 325 aa10.91□□□□□ -0.66
TRIM28-207ENST00000597136 DNAH7Q8WXX0 4024 aa10.91□□□□□ -0.66
TRIM28-207ENST00000597136 J3KRW8 73 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 K7EN84 100 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 GPX1P07203 203 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 NUTF2P61970 127 aaKnown RBP10.9□□□□□ -0.66
TRIM28-207ENST00000597136 SMUG1Q53HV7 270 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 PRR9Q5T870 116 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 SDF2L1Q9HCN8 221 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
TRIM28-207ENST00000597136 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.67
TRIM28-207ENST00000597136 KRBOX1C9JBD0 128 aa10.9□□□□□ -0.67
TRIM28-207ENST00000597136 GCGP01275 180 aa10.9□□□□□ -0.67
TRIM28-207ENST00000597136 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.67
TRIM28-207ENST00000597136 RNASE4P34096 147 aaKnown RBP10.9□□□□□ -0.67
TRIM28-207ENST00000597136 ZNF80P51504 273 aaPredicted RBP10.9□□□□□ -0.67
TRIM28-207ENST00000597136 MORN3Q6PF18 240 aaPredicted RBP10.9□□□□□ -0.67
TRIM28-207ENST00000597136 CSNK1G2-AS1Q8NCQ2 148 aa10.9□□□□□ -0.67
TRIM28-207ENST00000597136 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.67
TRIM28-207ENST00000597136 TENM2Q9NT68 2774 aa10.89□□□□□ -0.67
TRIM28-207ENST00000597136 CRXO43186 299 aaPredicted RBP10.89□□□□□ -0.67
TRIM28-207ENST00000597136 AMBPP02760 352 aa10.89□□□□□ -0.67
TRIM28-207ENST00000597136 CRIP1P50238 77 aa10.89□□□□□ -0.67
TRIM28-207ENST00000597136 RPL23P62829 140 aaKnown RBP10.89□□□□□ -0.67
TRIM28-207ENST00000597136 OR5I1Q13606 314 aa10.89□□□□□ -0.67
TRIM28-207ENST00000597136 GFI1BQ5VTD9 330 aa10.89□□□□□ -0.67
TRIM28-207ENST00000597136 CSMD3Q7Z407 3707 aa10.89□□□□□ -0.67
TRIM28-207ENST00000597136 C7orf71A4D174 169 aa10.88□□□□□ -0.67
TRIM28-207ENST00000597136 BTN1A1Q13410 526 aa10.88□□□□□ -0.67
TRIM28-207ENST00000597136 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
TRIM28-207ENST00000597136 TP53TG1Q9Y2A0 90 aa10.88□□□□□ -0.67
TRIM28-207ENST00000597136 ADIRFQ15847 76 aa10.87□□□□□ -0.67
TRIM28-207ENST00000597136 FAM162BQ5T6X4 162 aa10.87□□□□□ -0.67
TRIM28-207ENST00000597136 Q6AWC8 147 aa10.87□□□□□ -0.67
TRIM28-207ENST00000597136 Q6ZQT7 251 aa10.87□□□□□ -0.67
TRIM28-207ENST00000597136 BIN3Q9NQY0 253 aa10.87□□□□□ -0.67
TRIM28-207ENST00000597136 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 ATP6V1G1O75348 118 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 ZNF324O75467 553 aaPredicted RBP10.86□□□□□ -0.67
TRIM28-207ENST00000597136 PFN1P07737 140 aaKnown RBP10.86□□□□□ -0.67
TRIM28-207ENST00000597136 PNRC1Q12796 327 aaPredicted RBP10.86□□□□□ -0.67
TRIM28-207ENST00000597136 OR11H2Q8NH07 326 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 C1QTNF4Q9BXJ3 329 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 FABP5P3A8MUU1 101 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 SH2D1AO60880 128 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
TRIM28-207ENST00000597136 TRAV21A0A0B4J279 112 aa10.85□□□□□ -0.67
TRIM28-207ENST00000597136 C19orf71A6NCJ1 209 aa10.85□□□□□ -0.67
TRIM28-207ENST00000597136 INSP01308 110 aa10.85□□□□□ -0.67
TRIM28-207ENST00000597136 APOC3P02656 99 aa10.85□□□□□ -0.67
TRIM28-207ENST00000597136 RBMY1A1P0DJD3 496 aaKnown RBP10.85□□□□□ -0.67
TRIM28-207ENST00000597136 RBMY1CP0DJD4 496 aa10.85□□□□□ -0.67
TRIM28-207ENST00000597136 RBMY1FQ15415 496 aaKnown RBP10.85□□□□□ -0.67
TRIM28-207ENST00000597136 DEFB4AO15263 64 aa10.84□□□□□ -0.67
TRIM28-207ENST00000597136 DAZAP1Q96EP5 407 aaKnown RBP10.84□□□□□ -0.67
TRIM28-207ENST00000597136 WWC2-AS2Q96NR7 200 aa10.84□□□□□ -0.67
TRIM28-207ENST00000597136 C20orf144Q9BQM9 153 aa10.84□□□□□ -0.67
TRIM28-207ENST00000597136 RNASE7Q9H1E1 156 aaKnown RBP10.84□□□□□ -0.67
TRIM28-207ENST00000597136 C11orf21Q9P2W6 132 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms