RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 LINC00612Q8N6U2 182 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 RXFP4Q8TDU9 374 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 VSIG2Q96IQ7 327 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 C8orf49Q96NF6 230 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 KRTAP1-5Q9BYS1 174 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
SHKBP1-210ENST00000595874 TRAV8-1A0A0A6YYK1 113 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 A0A1W2PPV4 95 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 DIRC3C9JPN6 131 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 CRISP2P16562 243 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 FUSP35637 526 aaKnown RBP eCLIP7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 ACOT6Q3I5F7 207 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 SOHLH1Q5JUK2 328 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 IQCF2Q8IXL9 164 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 C6orf223Q8N319 242 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 ZNF680Q8NEM1 530 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 OR10G4Q8NGN3 311 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 OR10G9Q8NGN4 311 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 OR10G7Q8NGN6 311 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 MED28Q9H204 178 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 Q9H8V8 135 aa7.14□□□□□ -1.27
SHKBP1-210ENST00000595874 DNAH11Q96DT5 4516 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 GNRH2O43555 120 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 SPINK4O60575 86 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 ARL14EPLP0DKL9 152 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 TCL1AP56279 114 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 TAS2R45P59539 299 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 ZNF415Q09FC8 603 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 DAZ2Q13117 558 aaKnown RBP7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 CMTM2Q8TAZ6 248 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 SH3BGRL3Q9H299 93 aa7.13□□□□□ -1.27
SHKBP1-210ENST00000595874 FXYD6-FXYD2A0A087WZ82 144 aa7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 IGHV3-16A0A0C4DH30 117 aa7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 PAX4O43316 350 aa7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 CDC34P49427 236 aaPredicted RBP7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 ANXA2RQ3ZCQ2 193 aa7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 TVP23CQ96ET8 276 aa7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 BATF3Q9NR55 127 aa7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
SHKBP1-210ENST00000595874 TRGV4A0A0C4DH28 118 aa7.11□□□□□ -1.27
SHKBP1-210ENST00000595874 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
SHKBP1-210ENST00000595874 ATP6V0CP27449 155 aa7.11□□□□□ -1.27
SHKBP1-210ENST00000595874 FAM159AQ6UWV7 190 aa7.11□□□□□ -1.27
SHKBP1-210ENST00000595874 ZNF479Q96JC4 524 aa7.11□□□□□ -1.27
SHKBP1-210ENST00000595874 OTORQ9NRC9 128 aa7.11□□□□□ -1.27
SHKBP1-210ENST00000595874 IGHV3-73A0A0B4J1V6 119 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 SMLR1H3BR10 107 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 UBE2G2P60604 165 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 FHL2Q14192 279 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 ZNF266Q14584 549 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 RPL7L1Q6DKI1 246 aaKnown RBP7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 TMEM75Q8N9X5 138 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 LINC00467Q9BRT7 94 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 TREM1Q9NP99 234 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 MRPS16Q9Y3D3 137 aaKnown RBP7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 ICOSQ9Y6W8 199 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 PCLOQ9Y6V0 5065 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 RYR1P21817 5038 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 PKHD1P08F94 4074 aa7.1□□□□□ -1.27
SHKBP1-210ENST00000595874 RBAKDNA6NC62 111 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 C9JCJ5 164 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 NXPH4O95158 308 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 PTTG1O95997 202 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 TYMSP04818 313 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 GCHFRP30047 84 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 ZNF80P51504 273 aaPredicted RBP7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 FAM3BP58499 235 aaPredicted RBP7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 FAM74A1Q5RGS3 127 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 IBA57Q5T440 356 aaKnown RBP7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 PRNTQ86SH4 94 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 LYPD1Q8N2G4 141 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 RAB24Q969Q5 203 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 ST6GAL2Q96JF0 529 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 HHLA3Q9XRX5 114 aa7.09□□□□□ -1.27
SHKBP1-210ENST00000595874 TRGV11A0A075B6L2 103 aa7.08□□□□□ -1.28
SHKBP1-210ENST00000595874 TRAV34A0A0B4J273 112 aa7.08□□□□□ -1.28
SHKBP1-210ENST00000595874 CRYBA4P53673 196 aa7.08□□□□□ -1.28
SHKBP1-210ENST00000595874 Q6AWC8 147 aa7.08□□□□□ -1.28
SHKBP1-210ENST00000595874 PQLC2Q6ZP29 291 aa7.08□□□□□ -1.28
SHKBP1-210ENST00000595874 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
SHKBP1-210ENST00000595874 NMBP08949 121 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 STAG3L2P0CL84 134 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 STAG3L3P0CL85 134 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 MED14OSP0DP75 135 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 GYPEP15421 78 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 LINC00315P59091 139 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 SUMO1P63165 101 aaKnown RBP7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 WFDC10BQ8IUB3 73 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 OR4C5Q8NGB2 326 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 OR2G3Q8NGZ4 309 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 C11orf21Q9P2W6 132 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 PRO0255Q9UI72 69 aa7.07□□□□□ -1.28
SHKBP1-210ENST00000595874 TRAV21A0A0B4J279 112 aa7.06□□□□□ -1.28
SHKBP1-210ENST00000595874 A0A1B0GV50 99 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms