RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 SFRP2Q96HF1 295 aa9.69□□□□□ -0.86
SHKBP1-209ENST00000595803 CTDSP1Q9GZU7 261 aa9.69□□□□□ -0.86
SHKBP1-209ENST00000595803 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 GATCO43716 136 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 CD7P09564 240 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 HLA-DRB4P13762 266 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 LEPP41159 167 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 ODF3L2Q3SX64 289 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 IBA57Q5T440 356 aaKnown RBP9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 SAMD5Q5TGI4 173 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 COX8CQ7Z4L0 72 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 ZC2HC1AQ96GY0 325 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 HLA-DRB4X5D2U9 266 aa9.68□□□□□ -0.86
SHKBP1-209ENST00000595803 A0A087WWC5 75 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 H3BMM0 161 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 H7BYZ3 331 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 GPX1P07203 203 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 TSPOP30536 169 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 ZNF124Q15973 351 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 FAM231DQ6ZW35 169 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 STHQ8IWL8 128 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 NUDT10Q8NFP7 164 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 NUDT11Q96G61 164 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 ODF3Q96PU9 254 aa9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
SHKBP1-209ENST00000595803 ZNF705GA8MUZ8 300 aaPredicted RBP9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 J3KRW8 73 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 SCO1O75880 301 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 P01737 135 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 CRISP2P16562 243 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 CRIP1P50238 77 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 FAM162BQ5T6X4 162 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 LINC00322Q6ZN03 302 aaPredicted RBP9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 FAM19A4Q96LR4 140 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 TMEM242Q9NWH2 141 aa9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
SHKBP1-209ENST00000595803 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
SHKBP1-209ENST00000595803 RNASE4P34096 147 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-209ENST00000595803 ZNF80P51504 273 aaPredicted RBP9.65□□□□□ -0.86
SHKBP1-209ENST00000595803 WWC2-AS2Q96NR7 200 aa9.65□□□□□ -0.86
SHKBP1-209ENST00000595803 SMCO4Q9NRQ5 59 aa9.65□□□□□ -0.86
SHKBP1-209ENST00000595803 SH2D1AO60880 128 aa9.64□□□□□ -0.87
SHKBP1-209ENST00000595803 BTN1A1Q13410 526 aa9.64□□□□□ -0.87
SHKBP1-209ENST00000595803 OXLD1Q5BKU9 147 aa9.64□□□□□ -0.87
SHKBP1-209ENST00000595803 ZFAND2AQ8N6M9 145 aa9.64□□□□□ -0.87
SHKBP1-209ENST00000595803 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
SHKBP1-209ENST00000595803 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
SHKBP1-209ENST00000595803 RYR2Q92736 4967 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 TRAV21A0A0B4J279 112 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 TMEM189A5PLL7 270 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 CXorf65A6NEN9 183 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 A8MTW9 85 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 PFN1P07737 140 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 S100PP25815 95 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 CDKN1BP46527 198 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 FXYD7P58549 80 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 OR2D3Q8NGH3 330 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 RPP21Q9H633 154 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 V9GYV3 84 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 DNAH3Q8TD57 4116 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 SORL1Q92673 2214 aa9.63□□□□□ -0.87
SHKBP1-209ENST00000595803 C7orf71A4D174 169 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 A8MWL6 223 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 KLLNB2CW77 178 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 M0R2Z0 102 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 AMBPP02760 352 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 ORM1P02763 201 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 NUTF2P61970 127 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 SPINK13Q1W4C9 94 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 TMEM88Q6PEY1 159 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 KCNIP4Q6PIL6 250 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 AMTNQ6UX39 209 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 DEFB125Q8N687 156 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 IMMP2LQ96T52 175 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 TUBA4BQ9H853 241 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 IL36BQ9NZH7 164 aa9.62□□□□□ -0.87
SHKBP1-209ENST00000595803 XKRY2A2RUG3 117 aa9.61□□□□□ -0.87
SHKBP1-209ENST00000595803 RBMY1BA6NDE4 496 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-209ENST00000595803 RBMY1EA6NEQ0 496 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-209ENST00000595803 RBMY1DP0C7P1 496 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-209ENST00000595803 PRR9Q5T870 116 aa9.61□□□□□ -0.87
SHKBP1-209ENST00000595803 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
SHKBP1-209ENST00000595803 WFDC10AQ9H1F0 79 aa9.61□□□□□ -0.87
SHKBP1-209ENST00000595803 TENM2Q9NT68 2774 aa9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 TRAV12-2A0A075B6T6 113 aa9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 TMSB15BA0A087X1C1 80 aa9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 TRAV12-3A0A0B4J271 114 aa9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 KIR3DS1Q14943 382 aa9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 CT83Q5H943 113 aa9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 Q6AWC8 147 aa9.6□□□□□ -0.87
SHKBP1-209ENST00000595803 AGRNO00468 2067 aa9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
SHKBP1-209ENST00000595803 RPL19P84098 196 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms