RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 PYGO2Q9BRQ0 406 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 TREM1Q9NP99 234 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 PSG8Q9UQ74 426 aa10.3□□□□□ -0.76
LIG1-208ENST00000595758 F6UZH7 168 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 IGLV2-11P01706 119 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 ATP5G3P48201 142 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 FLI1Q01543 452 aaPredicted RBP10.29□□□□□ -0.76
LIG1-208ENST00000595758 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 TVP23CQ96ET8 276 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 LINC00479Q96M42 142 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 TCEAL7Q9BRU2 100 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 NDFIP1Q9BT67 221 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
LIG1-208ENST00000595758 TRAV34A0A0B4J273 112 aa10.28□□□□□ -0.76
LIG1-208ENST00000595758 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
LIG1-208ENST00000595758 PRNTQ86SH4 94 aa10.28□□□□□ -0.76
LIG1-208ENST00000595758 TMEM263Q8WUH6 116 aaKnown RBP10.28□□□□□ -0.76
LIG1-208ENST00000595758 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
LIG1-208ENST00000595758 GNG13Q9P2W3 67 aa10.28□□□□□ -0.76
LIG1-208ENST00000595758 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
LIG1-208ENST00000595758 TEX48A0A1B0GUV7 120 aa10.27□□□□□ -0.77
LIG1-208ENST00000595758 RGS13O14921 159 aa10.27□□□□□ -0.77
LIG1-208ENST00000595758 C12orf74Q32Q52 190 aa10.27□□□□□ -0.77
LIG1-208ENST00000595758 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.77
LIG1-208ENST00000595758 Q6ZQT7 251 aa10.27□□□□□ -0.77
LIG1-208ENST00000595758 EIF4E3Q8N5X7 224 aaKnown RBP10.27□□□□□ -0.77
LIG1-208ENST00000595758 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
LIG1-208ENST00000595758 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
LIG1-208ENST00000595758 MANBALQ9NQG1 85 aa10.27□□□□□ -0.77
LIG1-208ENST00000595758 IGHV1OR15-1A0A075B7D0 117 aa10.26□□□□□ -0.77
LIG1-208ENST00000595758 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
LIG1-208ENST00000595758 CBY3A6NI87 242 aa10.26□□□□□ -0.77
LIG1-208ENST00000595758 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
LIG1-208ENST00000595758 BLOC1S1P78537 153 aa10.26□□□□□ -0.77
LIG1-208ENST00000595758 Q6AWC8 147 aa10.26□□□□□ -0.77
LIG1-208ENST00000595758 CEMP1Q6PRD7 247 aaPredicted RBP10.26□□□□□ -0.77
LIG1-208ENST00000595758 ZNF767PQ75MW2 155 aa10.26□□□□□ -0.77
LIG1-208ENST00000595758 RNASE8Q8TDE3 154 aaKnown RBP10.26□□□□□ -0.77
LIG1-208ENST00000595758 TRAV21A0A0B4J279 112 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 LYRM9A8MSI8 78 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 IFNA1P01562 189 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 AKR1C3P42330 323 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 Q6ZTC4 211 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 FMC1Q96HJ9 113 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 C8orf49Q96NF6 230 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 KLF12Q9Y4X4 402 aa10.25□□□□□ -0.77
LIG1-208ENST00000595758 TIMM8BQ9Y5J9 83 aaPredicted RBP10.25□□□□□ -0.77
LIG1-208ENST00000595758 UBE2G1P62253 170 aa10.24□□□□□ -0.77
LIG1-208ENST00000595758 SMUG1Q53HV7 270 aa10.24□□□□□ -0.77
LIG1-208ENST00000595758 MUC21Q5SSG8 566 aa10.24□□□□□ -0.77
LIG1-208ENST00000595758 FAM159AQ6UWV7 190 aa10.24□□□□□ -0.77
LIG1-208ENST00000595758 Q86TA4 180 aa10.24□□□□□ -0.77
LIG1-208ENST00000595758 ZNF680Q8NEM1 530 aa10.24□□□□□ -0.77
LIG1-208ENST00000595758 NOP10Q9NPE3 64 aaKnown RBP10.24□□□□□ -0.77
LIG1-208ENST00000595758 SCO2A0A1W2PP80 73 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 SNURFLB1AK76 121 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 GCGP01275 180 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
LIG1-208ENST00000595758 DAD1P61803 113 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 TMEM183BQ1AE95 376 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 TXNDC17Q9BRA2 123 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 NAGKQ9UJ70 344 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 TP53TG3Q9ULZ0 132 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 ZFP30Q9Y2G7 519 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 KLK5Q9Y337 293 aaPredicted RBP10.23□□□□□ -0.77
LIG1-208ENST00000595758 TENM2Q9NT68 2774 aa10.23□□□□□ -0.77
LIG1-208ENST00000595758 TRAV10A0A0B4J240 114 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 TRBV6-1A0A0K0K1D8 114 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 BCL2P10415 239 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 ZNF80P51504 273 aaPredicted RBP10.22□□□□□ -0.77
LIG1-208ENST00000595758 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 C2CD4CQ8TF44 421 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 CSMD3Q7Z407 3707 aa10.22□□□□□ -0.77
LIG1-208ENST00000595758 STARD9Q9P2P6 4700 aa10.21□□□□□ -0.77
LIG1-208ENST00000595758 PFN1P07737 140 aaKnown RBP10.21□□□□□ -0.77
LIG1-208ENST00000595758 TAGLN2P37802 199 aaKnown RBP10.21□□□□□ -0.77
LIG1-208ENST00000595758 MEF2BQ02080 365 aaPredicted RBP10.21□□□□□ -0.77
LIG1-208ENST00000595758 DAZ2Q13117 558 aaKnown RBP10.21□□□□□ -0.77
LIG1-208ENST00000595758 TDRG1Q3Y452 100 aa10.21□□□□□ -0.77
LIG1-208ENST00000595758 TMEM183AQ8IXX5 376 aa10.21□□□□□ -0.77
LIG1-208ENST00000595758 VAX2Q9UIW0 290 aa10.21□□□□□ -0.77
LIG1-208ENST00000595758 TRGV11A0A075B6L2 103 aa10.2□□□□□ -0.78
LIG1-208ENST00000595758 DEFB131BA0A096LNP1 70 aa10.2□□□□□ -0.78
LIG1-208ENST00000595758 LTAP01374 205 aa10.2□□□□□ -0.78
LIG1-208ENST00000595758 IBA57Q5T440 356 aaKnown RBP10.2□□□□□ -0.78
LIG1-208ENST00000595758 TEX261Q6UWH6 196 aa10.2□□□□□ -0.78
LIG1-208ENST00000595758 LYPD6BQ8NI32 183 aa10.2□□□□□ -0.78
LIG1-208ENST00000595758 C11orf52Q96A22 123 aa10.2□□□□□ -0.78
LIG1-208ENST00000595758 KCNS1Q96KK3 526 aa10.2□□□□□ -0.78
LIG1-208ENST00000595758 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
LIG1-208ENST00000595758 GNRH2O43555 120 aa10.19□□□□□ -0.78
LIG1-208ENST00000595758 PDE6DO43924 150 aa10.19□□□□□ -0.78
LIG1-208ENST00000595758 HTN3P15516 51 aa10.19□□□□□ -0.78
LIG1-208ENST00000595758 TCL1AP56279 114 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms