RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 LYRM9A8MSI8 78 aa12.68□□□□□ -0.38
HOMER3-208ENST00000595756 CT45A10P0DMU9 189 aa12.68□□□□□ -0.38
HOMER3-208ENST00000595756 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
HOMER3-208ENST00000595756 SUMO1P63165 101 aaKnown RBP12.68□□□□□ -0.38
HOMER3-208ENST00000595756 UBE2DNLQ8IWF7 75 aa12.68□□□□□ -0.38
HOMER3-208ENST00000595756 TMEM256Q8N2U0 113 aa12.68□□□□□ -0.38
HOMER3-208ENST00000595756 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
HOMER3-208ENST00000595756 NACAE9PAV3 2078 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 IGKV2-40A0A087WW87 121 aaPredicted RBP12.67□□□□□ -0.38
HOMER3-208ENST00000595756 A0A1B0GVY2 172 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 IGKV2D-40P01614 121 aaPredicted RBP12.67□□□□□ -0.38
HOMER3-208ENST00000595756 HTN3P15516 51 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 ZNF138P52744 262 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 NKX2-5P52952 324 aaPredicted RBP12.67□□□□□ -0.38
HOMER3-208ENST00000595756 RNF212Q495C1 297 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 TMPRSS5Q9H3S3 457 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 LENEPQ9Y5L5 61 aa12.67□□□□□ -0.38
HOMER3-208ENST00000595756 TRAV1-1A0A0B4J248 108 aa12.66□□□□□ -0.38
HOMER3-208ENST00000595756 FBLL1A6NHQ2 334 aaKnown RBP12.66□□□□□ -0.38
HOMER3-208ENST00000595756 RTL8CO15255 209 aa12.66□□□□□ -0.38
HOMER3-208ENST00000595756 ERCC8Q13216 396 aa12.66□□□□□ -0.38
HOMER3-208ENST00000595756 TMEM88Q6PEY1 159 aa12.66□□□□□ -0.38
HOMER3-208ENST00000595756 VGLL1Q99990 258 aa12.66□□□□□ -0.38
HOMER3-208ENST00000595756 TCEAL7Q9BRU2 100 aa12.66□□□□□ -0.38
HOMER3-208ENST00000595756 PCLOQ9Y6V0 5065 aa12.65□□□□□ -0.38
HOMER3-208ENST00000595756 ZNF705GA8MUZ8 300 aaPredicted RBP12.65□□□□□ -0.38
HOMER3-208ENST00000595756 TCRAP04437 139 aa12.65□□□□□ -0.38
HOMER3-208ENST00000595756 PRB4P10163 310 aaPredicted RBP12.65□□□□□ -0.38
HOMER3-208ENST00000595756 CRISP2P16562 243 aa12.65□□□□□ -0.38
HOMER3-208ENST00000595756 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
HOMER3-208ENST00000595756 FAM19A4Q96LR4 140 aa12.65□□□□□ -0.38
HOMER3-208ENST00000595756 EPDR1Q9UM22 224 aa12.65□□□□□ -0.38
HOMER3-208ENST00000595756 RPH3ALQ9UNE2 315 aa12.65□□□□□ -0.38
HOMER3-208ENST00000595756 TRAV12-2A0A075B6T6 113 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 FAM74A7A6NL05 159 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 GGTLC3B5MD39 225 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 F6UZH7 168 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 M0R2N4 97 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 UBE2G2P60604 165 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 Q6ZR54 194 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 ATG101Q9BSB4 218 aa12.64□□□□□ -0.39
HOMER3-208ENST00000595756 PLAC8L1A1L4L8 177 aa12.63□□□□□ -0.39
HOMER3-208ENST00000595756 KLLNB2CW77 178 aa12.63□□□□□ -0.39
HOMER3-208ENST00000595756 H7BYZ3 331 aa12.63□□□□□ -0.39
HOMER3-208ENST00000595756 IFNA7P01567 189 aa12.63□□□□□ -0.39
HOMER3-208ENST00000595756 GPX1P07203 203 aa12.63□□□□□ -0.39
HOMER3-208ENST00000595756 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
HOMER3-208ENST00000595756 LINC01587Q99440 93 aa12.63□□□□□ -0.39
HOMER3-208ENST00000595756 PRM2P04554 102 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 FAM3BP58499 235 aaPredicted RBP12.62□□□□□ -0.39
HOMER3-208ENST00000595756 TAS2R60P59551 318 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 GFI1BQ5VTD9 330 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 CST9LP1Q5W188 147 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 NDFIP1Q9BT67 221 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 KRTAP17-1Q9BYP8 105 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
HOMER3-208ENST00000595756 IGLV2-18A0A075B6J9 118 aa12.61□□□□□ -0.39
HOMER3-208ENST00000595756 C7orf71A4D174 169 aa12.61□□□□□ -0.39
HOMER3-208ENST00000595756 GNG5P63218 68 aa12.61□□□□□ -0.39
HOMER3-208ENST00000595756 BLOC1S1P78537 153 aa12.61□□□□□ -0.39
HOMER3-208ENST00000595756 ALKAL2Q6UX46 152 aa12.61□□□□□ -0.39
HOMER3-208ENST00000595756 TXNDC17Q9BRA2 123 aa12.61□□□□□ -0.39
HOMER3-208ENST00000595756 A0A1B0GV50 99 aa12.6□□□□□ -0.39
HOMER3-208ENST00000595756 PAGE4O60829 102 aa12.6□□□□□ -0.39
HOMER3-208ENST00000595756 CCDC28AQ8IWP9 274 aa12.6□□□□□ -0.39
HOMER3-208ENST00000595756 TMEM75Q8N9X5 138 aa12.6□□□□□ -0.39
HOMER3-208ENST00000595756 PYGO2Q9BRQ0 406 aa12.6□□□□□ -0.39
HOMER3-208ENST00000595756 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
HOMER3-208ENST00000595756 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 J3KRW8 73 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 PEX7O00628 323 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 IFNA1P01562 189 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 DEFB130BP0DP73 79 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 DEFB130AP0DP74 79 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 AZU1P20160 251 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 FLI1Q01543 452 aaPredicted RBP12.59□□□□□ -0.39
HOMER3-208ENST00000595756 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 SAPCD1Q5SSQ6 148 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 ZNF493Q6ZR52 646 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 ZFAND2AQ8N6M9 145 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 Q8TAT8 98 aa12.59□□□□□ -0.39
HOMER3-208ENST00000595756 ATP5G1P05496 136 aa12.58□□□□□ -0.4
HOMER3-208ENST00000595756 RNASE4P34096 147 aaKnown RBP12.58□□□□□ -0.4
HOMER3-208ENST00000595756 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
HOMER3-208ENST00000595756 ATP5G3P48201 142 aa12.58□□□□□ -0.4
HOMER3-208ENST00000595756 KIR3DS1Q14943 382 aa12.58□□□□□ -0.4
HOMER3-208ENST00000595756 RNASE8Q8TDE3 154 aaKnown RBP12.58□□□□□ -0.4
HOMER3-208ENST00000595756 TMEM263Q8WUH6 116 aaKnown RBP12.58□□□□□ -0.4
HOMER3-208ENST00000595756 PSG8Q9UQ74 426 aa12.58□□□□□ -0.4
HOMER3-208ENST00000595756 ZNF324O75467 553 aaPredicted RBP12.57□□□□□ -0.4
HOMER3-208ENST00000595756 LINC00467Q9BRT7 94 aa12.57□□□□□ -0.4
HOMER3-208ENST00000595756 TREM1Q9NP99 234 aa12.57□□□□□ -0.4
HOMER3-208ENST00000595756 GNG13Q9P2W3 67 aa12.57□□□□□ -0.4
HOMER3-208ENST00000595756 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
HOMER3-208ENST00000595756 RYR1P21817 5038 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms