RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 C18orf15Q96N68 181 aa11.72□□□□□ -0.53
CCDC9-202ENST00000595659 ATP5SQ99766 215 aa11.72□□□□□ -0.53
CCDC9-202ENST00000595659 SSNA1O43805 119 aa11.71□□□□□ -0.53
CCDC9-202ENST00000595659 UBE2L3P68036 154 aaKnown RBP11.71□□□□□ -0.53
CCDC9-202ENST00000595659 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
CCDC9-202ENST00000595659 ST6GAL2Q96JF0 529 aa11.71□□□□□ -0.53
CCDC9-202ENST00000595659 HYLS1Q96M11 299 aa11.71□□□□□ -0.53
CCDC9-202ENST00000595659 C8orf49Q96NF6 230 aa11.71□□□□□ -0.53
CCDC9-202ENST00000595659 MDFICQ9P1T7 246 aa11.71□□□□□ -0.53
CCDC9-202ENST00000595659 HSPB11Q9Y547 144 aa11.71□□□□□ -0.53
CCDC9-202ENST00000595659 MPC2O95563 127 aa11.7□□□□□ -0.54
CCDC9-202ENST00000595659 KRTAP10-2P60368 255 aa11.7□□□□□ -0.54
CCDC9-202ENST00000595659 SCGB1C1Q8TD33 95 aa11.7□□□□□ -0.54
CCDC9-202ENST00000595659 MARVELD1Q9BSK0 173 aa11.7□□□□□ -0.54
CCDC9-202ENST00000595659 A6NHS1 94 aa11.69□□□□□ -0.54
CCDC9-202ENST00000595659 IFNA5P01569 189 aa11.69□□□□□ -0.54
CCDC9-202ENST00000595659 ZNF415Q09FC8 603 aa11.69□□□□□ -0.54
CCDC9-202ENST00000595659 WFDC1Q9HC57 220 aa11.69□□□□□ -0.54
CCDC9-202ENST00000595659 RPH3ALQ9UNE2 315 aa11.69□□□□□ -0.54
CCDC9-202ENST00000595659 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
CCDC9-202ENST00000595659 ICOSQ9Y6W8 199 aa11.69□□□□□ -0.54
CCDC9-202ENST00000595659 A0A1W2PPQ1 181 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 DIRC3C9JPN6 131 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 NXPH4O95158 308 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
CCDC9-202ENST00000595659 CRYBA4P53673 196 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 LINC00315P59091 139 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 FHL2Q14192 279 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 ZNF266Q14584 549 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 MBD2Q9UBB5 411 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 PRO0255Q9UI72 69 aa11.68□□□□□ -0.54
CCDC9-202ENST00000595659 APOBP04114 4563 aaKnown RBP11.67□□□□□ -0.54
CCDC9-202ENST00000595659 SIVA1O15304 175 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 CDK2AP2O75956 126 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 TMEM183BQ1AE95 376 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 TMEM183AQ8IXX5 376 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 LYPD1Q8N2G4 141 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 MAPKAPK5-AS1Q8N8E1 139 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 NAGKQ9UJ70 344 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 TNFRSF18Q9Y5U5 241 aa11.67□□□□□ -0.54
CCDC9-202ENST00000595659 DNAH5Q8TE73 4624 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 TRBV7-9A0A0J9YWB2 115 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 PGPA6NDG6 321 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
CCDC9-202ENST00000595659 TAS2R45P59539 299 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 LYPD5Q6UWN5 251 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 PTTG2Q9NZH5 202 aa11.66□□□□□ -0.54
CCDC9-202ENST00000595659 PET100P0DJ07 73 aa11.65□□□□□ -0.54
CCDC9-202ENST00000595659 FUSP35637 526 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC9-202ENST00000595659 FAM159AQ6UWV7 190 aa11.65□□□□□ -0.54
CCDC9-202ENST00000595659 ZNF479Q96JC4 524 aa11.65□□□□□ -0.54
CCDC9-202ENST00000595659 GNRH2O43555 120 aa11.64□□□□□ -0.55
CCDC9-202ENST00000595659 DEFA1P59665 94 aa11.64□□□□□ -0.55
CCDC9-202ENST00000595659 DEFA3P59666 94 aa11.64□□□□□ -0.55
CCDC9-202ENST00000595659 RAB2AP61019 212 aa11.64□□□□□ -0.55
CCDC9-202ENST00000595659 SLAQ13239 276 aa11.64□□□□□ -0.55
CCDC9-202ENST00000595659 MRPL23Q16540 153 aaKnown RBP11.64□□□□□ -0.55
CCDC9-202ENST00000595659 Q6AWC8 147 aa11.64□□□□□ -0.55
CCDC9-202ENST00000595659 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
CCDC9-202ENST00000595659 MUC4Q99102 2169 aa11.63□□□□□ -0.55
CCDC9-202ENST00000595659 BTF3P20290 206 aaKnown RBP11.63□□□□□ -0.55
CCDC9-202ENST00000595659 GNG5P63218 68 aa11.63□□□□□ -0.55
CCDC9-202ENST00000595659 Q6ZRN7 208 aaPredicted RBP11.63□□□□□ -0.55
CCDC9-202ENST00000595659 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
CCDC9-202ENST00000595659 CMTM2Q8TAZ6 248 aa11.63□□□□□ -0.55
CCDC9-202ENST00000595659 TRAV8-1A0A0A6YYK1 113 aa11.62□□□□□ -0.55
CCDC9-202ENST00000595659 A0A1W2PPV4 95 aa11.62□□□□□ -0.55
CCDC9-202ENST00000595659 F6UZH7 168 aa11.62□□□□□ -0.55
CCDC9-202ENST00000595659 K7EQD1 137 aa11.62□□□□□ -0.55
CCDC9-202ENST00000595659 ACOT6Q3I5F7 207 aaPredicted RBP11.62□□□□□ -0.55
CCDC9-202ENST00000595659 NEGR1Q7Z3B1 354 aa11.62□□□□□ -0.55
CCDC9-202ENST00000595659 SGK494Q96LW2 274 aa11.62□□□□□ -0.55
CCDC9-202ENST00000595659 LENEPQ9Y5L5 61 aa11.62□□□□□ -0.55
CCDC9-202ENST00000595659 TRGV11A0A075B6L2 103 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 GYPEP15421 78 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 OR10G4Q8NGN3 311 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 OR10G9Q8NGN4 311 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 OR10G7Q8NGN6 311 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 RASL10AQ92737 203 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 TVP23CQ96ET8 276 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 SPXQ9BT56 116 aa11.61□□□□□ -0.55
CCDC9-202ENST00000595659 SRIP30626 198 aa11.6□□□□□ -0.55
CCDC9-202ENST00000595659 FAM74A1Q5RGS3 127 aa11.6□□□□□ -0.55
CCDC9-202ENST00000595659 TREM1Q9NP99 234 aa11.6□□□□□ -0.55
CCDC9-202ENST00000595659 IGHV3-16A0A0C4DH30 117 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 LOC100131303A0A0U1RQF7 123 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 PQLC2Q6ZP29 291 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 IQCF2Q8IXL9 164 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 OR4C5Q8NGB2 326 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 PCNPQ8WW12 178 aaKnown RBP11.59□□□□□ -0.55
CCDC9-202ENST00000595659 TMED6Q8WW62 240 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 SCRT2Q9NQ03 307 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 ALG5Q9Y673 324 aa11.59□□□□□ -0.55
CCDC9-202ENST00000595659 TRAV21A0A0B4J279 112 aa11.58□□□□□ -0.56
CCDC9-202ENST00000595659 TYMSP04818 313 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms