RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 LENEPQ9Y5L5 61 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 ZNF727A8MUV8 499 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 PRAC2D3DTV9 90 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 NPIPB6E9PJ23 425 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 SFTA3P0C7M3 94 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 GNG4P50150 75 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 SRSF3P84103 164 aaKnown RBP11.22□□□□□ -0.61
FOXA3-202ENST00000594297 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 C2CD4CQ8TF44 421 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 PSG8Q9UQ74 426 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
FOXA3-202ENST00000594297 TRBV7-9A0A0J9YWB2 115 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 KNCNA6PVL3 124 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 F6UB75 175 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 UBE2CO00762 179 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 LEPP41159 167 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 BAGE2Q86Y30 109 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 CLUHP3Q96NS8 147 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 VGLL1Q99990 258 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 AGPAT4-IT1Q9H0P7 198 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 PARLQ9H300 379 aa11.21□□□□□ -0.61
FOXA3-202ENST00000594297 TRAV34A0A0B4J273 112 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 TMEM218A2RU14 115 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 F8W036 122 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 H3BMM0 161 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 AMBPP02760 352 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 ZNF705DP0CH99 300 aaPredicted RBP11.2□□□□□ -0.62
FOXA3-202ENST00000594297 ZNF705BP0CI00 300 aaPredicted RBP11.2□□□□□ -0.62
FOXA3-202ENST00000594297 CT45A10P0DMU9 189 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
FOXA3-202ENST00000594297 ERCC8Q13216 396 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 SMIM12Q96EX1 92 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 NIPSNAP3BQ9BS92 247 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
FOXA3-202ENST00000594297 KIR2DL5BA0A0G2JN68 375 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 KIR2DL5BA0A0G2JPC4 375 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 C9JCJ5 164 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 IGKV3-20P01619 116 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
FOXA3-202ENST00000594297 TMEM241Q24JQ0 296 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
FOXA3-202ENST00000594297 KIR2DL5AQ8N109 375 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 KIR2DL5BQ8NHK3 375 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
FOXA3-202ENST00000594297 PKD1P98161 4303 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 C9JQL5 133 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 GPX1P07203 203 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 DEFB1P60022 68 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 SMUG1Q53HV7 270 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 CENPWQ5EE01 88 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 Q86TA4 180 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 SLC7A5P1Q8MH63 180 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 NAT8Q9UHE5 227 aa11.18□□□□□ -0.62
FOXA3-202ENST00000594297 LTAP01374 205 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
FOXA3-202ENST00000594297 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 DERL1Q9BUN8 251 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 SEC11CQ9BY50 192 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 KRTAP4-5Q9BYR2 181 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 LY96Q9Y6Y9 160 aa11.17□□□□□ -0.62
FOXA3-202ENST00000594297 IGLV2-11P01706 119 aa11.16□□□□□ -0.62
FOXA3-202ENST00000594297 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
FOXA3-202ENST00000594297 MGST1P10620 155 aaKnown RBP11.16□□□□□ -0.62
FOXA3-202ENST00000594297 CDKN1BP46527 198 aa11.16□□□□□ -0.62
FOXA3-202ENST00000594297 ZNF124Q15973 351 aa11.16□□□□□ -0.62
FOXA3-202ENST00000594297 Q8TAT8 98 aa11.16□□□□□ -0.62
FOXA3-202ENST00000594297 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
FOXA3-202ENST00000594297 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
FOXA3-202ENST00000594297 A8MTW9 85 aa11.15□□□□□ -0.62
FOXA3-202ENST00000594297 CRISP2P16562 243 aa11.15□□□□□ -0.62
FOXA3-202ENST00000594297 PNRC1Q12796 327 aaPredicted RBP11.15□□□□□ -0.62
FOXA3-202ENST00000594297 TVP23CQ96ET8 276 aa11.15□□□□□ -0.62
FOXA3-202ENST00000594297 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.62
FOXA3-202ENST00000594297 APLNQ9ULZ1 77 aa11.15□□□□□ -0.62
FOXA3-202ENST00000594297 MUC4Q99102 2169 aa11.15□□□□□ -0.62
FOXA3-202ENST00000594297 TCTAP57738 103 aa11.14□□□□□ -0.63
FOXA3-202ENST00000594297 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
FOXA3-202ENST00000594297 CSTL1Q9H114 145 aa11.14□□□□□ -0.63
FOXA3-202ENST00000594297 HSPG2P98160 4391 aa11.13□□□□□ -0.63
FOXA3-202ENST00000594297 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
FOXA3-202ENST00000594297 GCGP01275 180 aa11.13□□□□□ -0.63
FOXA3-202ENST00000594297 INSP01308 110 aa11.13□□□□□ -0.63
FOXA3-202ENST00000594297 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
FOXA3-202ENST00000594297 SPINK13Q1W4C9 94 aa11.13□□□□□ -0.63
FOXA3-202ENST00000594297 OCC1Q8TAD7 63 aa11.13□□□□□ -0.63
FOXA3-202ENST00000594297 C20orf144Q9BQM9 153 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms