RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 RNASE7Q9H1E1 156 aaKnown RBP14.76□□□□□ -0.05
LSM4-203ENST00000593829 C20orf202A1L168 122 aa14.75□□□□□ -0.05
LSM4-203ENST00000593829 TMEM61Q8N0U2 210 aa14.75□□□□□ -0.05
LSM4-203ENST00000593829 TRAV25A0A0B4J276 109 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 ZNF785A8K8V0 405 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 TOMM40O96008 361 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 C3orf79P0CE67 100 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 SRIP30626 198 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 PMCHL1Q16048 86 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 RBPMS2Q6ZRY4 209 aaKnown RBP14.74□□□□□ -0.05
LSM4-203ENST00000593829 TSKUQ8WUA8 353 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 RCHY1Q96PM5 261 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 RHPN1-AS1Q9BWJ2 59 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 IGKV1D-37A0A075B6S9 117 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 IGHV3-49A0A0A0MS15 119 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 CHEK1O14757 476 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 HYPMO75409 117 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 APCSP02743 223 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 BMI1P35226 326 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 METTL26Q96S19 204 aa14.74□□□□□ -0.05
LSM4-203ENST00000593829 PSG1P11464 419 aa14.73□□□□□ -0.05
LSM4-203ENST00000593829 GTSCR1Q86UQ5 136 aa14.73□□□□□ -0.05
LSM4-203ENST00000593829 THAP8Q8NA92 274 aa14.73□□□□□ -0.05
LSM4-203ENST00000593829 TRGV9Q99603 122 aa14.73□□□□□ -0.05
LSM4-203ENST00000593829 MRPS16Q9Y3D3 137 aaKnown RBP14.73□□□□□ -0.05
LSM4-203ENST00000593829 ORAOV1Q8WV07 137 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 ZNF331Q9NQX6 463 aaPredicted RBP14.72□□□□□ -0.05
LSM4-203ENST00000593829 LAMTOR2Q9Y2Q5 125 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 IGKV1OR2-108A0A075B7D4 117 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 IGHV3OR16-13A0A075B7E8 117 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 IGHV3-74A0A0B4J1X5 117 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 OR7C2O60412 319 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 IL4P05112 153 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 PMCHP20382 165 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 SMAD5-AS1Q9Y6J3 95 aa14.72□□□□□ -0.05
LSM4-203ENST00000593829 HNRNPA3P51991 378 aaKnown RBP14.71□□□□□ -0.05
LSM4-203ENST00000593829 BATFQ16520 125 aa14.71□□□□□ -0.05
LSM4-203ENST00000593829 KIAA1644Q3SXP7 199 aa14.71□□□□□ -0.05
LSM4-203ENST00000593829 C18orf32Q8TCD1 76 aa14.71□□□□□ -0.05
LSM4-203ENST00000593829 BORCS7Q96B45 105 aa14.71□□□□□ -0.05
LSM4-203ENST00000593829 FAM167A-AS1Q96KT0 104 aa14.71□□□□□ -0.05
LSM4-203ENST00000593829 APOHP02749 345 aaPredicted RBP14.7□□□□□ -0.06
LSM4-203ENST00000593829 Q8N1Y9 231 aa14.7□□□□□ -0.06
LSM4-203ENST00000593829 GRAMD2BQ96HH9 432 aa14.7□□□□□ -0.06
LSM4-203ENST00000593829 Q6ZN92 141 aa14.7□□□□□ -0.06
LSM4-203ENST00000593829 SPAG8Q99932 426 aaPredicted RBP14.7□□□□□ -0.06
LSM4-203ENST00000593829 MRPL54Q6P161 138 aaKnown RBP14.69□□□□□ -0.06
LSM4-203ENST00000593829 RNF125Q96EQ8 232 aa14.69□□□□□ -0.06
LSM4-203ENST00000593829 PRKDCP78527 4128 aaKnown RBP14.69□□□□□ -0.06
LSM4-203ENST00000593829 IGHV3-66A0A0C4DH42 116 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 SPINK4O60575 86 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 TCL1AP56279 114 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 ATP5L2Q7Z4Y8 100 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 STPG4Q8N801 248 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 SMIM12Q96EX1 92 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 SLC25A2Q9BXI2 301 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 DNAJC4Q9NNZ3 241 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 MGST1P10620 155 aaKnown RBP14.68□□□□□ -0.06
LSM4-203ENST00000593829 TFPI2P48307 235 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 FAM162BQ5T6X4 162 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 DMRTA1Q5VZB9 504 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 RABAC1Q9UI14 185 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 U3KQE9 123 aa14.68□□□□□ -0.06
LSM4-203ENST00000593829 CD7P09564 240 aa14.67□□□□□ -0.06
LSM4-203ENST00000593829 SLAQ13239 276 aa14.67□□□□□ -0.06
LSM4-203ENST00000593829 TCF24Q7RTU0 167 aa14.67□□□□□ -0.06
LSM4-203ENST00000593829 TSPOP30536 169 aa14.66□□□□□ -0.06
LSM4-203ENST00000593829 OR1L4Q8NGR5 311 aa14.66□□□□□ -0.06
LSM4-203ENST00000593829 TRAV9-2A0A087WT02 112 aa14.66□□□□□ -0.06
LSM4-203ENST00000593829 LYZP61626 148 aa14.66□□□□□ -0.06
LSM4-203ENST00000593829 UBE2L3P68036 154 aaKnown RBP14.66□□□□□ -0.06
LSM4-203ENST00000593829 OR4C46A6NHA9 309 aa14.65□□□□□ -0.06
LSM4-203ENST00000593829 B9D2Q9BPU9 175 aa14.65□□□□□ -0.06
LSM4-203ENST00000593829 PEX7O00628 323 aa14.64□□□□□ -0.07
LSM4-203ENST00000593829 HSBP1O75506 76 aa14.64□□□□□ -0.07
LSM4-203ENST00000593829 IGHV4-30-4P0DP06 118 aa14.64□□□□□ -0.07
LSM4-203ENST00000593829 GATA2P23769 480 aaPredicted RBP14.64□□□□□ -0.07
LSM4-203ENST00000593829 RPL11P62913 178 aaKnown RBP14.64□□□□□ -0.07
LSM4-203ENST00000593829 FAM19A2Q8N3H0 131 aa14.64□□□□□ -0.07
LSM4-203ENST00000593829 NUP35Q8NFH5 326 aa14.64□□□□□ -0.07
LSM4-203ENST00000593829 ALKBH7Q9BT30 221 aaPredicted RBP14.64□□□□□ -0.07
LSM4-203ENST00000593829 IGKV3-7A0A075B6H7 116 aa14.64□□□□□ -0.07
LSM4-203ENST00000593829 A0A1B0GXF2 115 aa14.64□□□□□ -0.07
LSM4-203ENST00000593829 HIST1H1EP10412 219 aaKnown RBP14.64□□□□□ -0.07
LSM4-203ENST00000593829 A8MZ25 164 aa14.63□□□□□ -0.07
LSM4-203ENST00000593829 OR11H12B2RN74 326 aa14.63□□□□□ -0.07
LSM4-203ENST00000593829 GDF5OSQ5U4N7 250 aa14.63□□□□□ -0.07
LSM4-203ENST00000593829 C16orf54Q6UWD8 224 aa14.63□□□□□ -0.07
LSM4-203ENST00000593829 NUDT10Q8NFP7 164 aa14.63□□□□□ -0.07
LSM4-203ENST00000593829 OR2D3Q8NGH3 330 aa14.63□□□□□ -0.07
LSM4-203ENST00000593829 NUDT11Q96G61 164 aa14.63□□□□□ -0.07
LSM4-203ENST00000593829 BUB3O43684 328 aa14.62□□□□□ -0.07
LSM4-203ENST00000593829 NTF3P20783 257 aa14.62□□□□□ -0.07
LSM4-203ENST00000593829 UBE2G1P62253 170 aa14.62□□□□□ -0.07
LSM4-203ENST00000593829 PAXXQ9BUH6 204 aa14.62□□□□□ -0.07
LSM4-203ENST00000593829 MS4A6AQ9H2W1 248 aa14.62□□□□□ -0.07
LSM4-203ENST00000593829 C19orf73Q9NVV2 129 aa14.62□□□□□ -0.07
LSM4-203ENST00000593829 CA1P00915 261 aaPredicted RBP14.61□□□□□ -0.07
LSM4-203ENST00000593829 ORM2P19652 201 aa14.61□□□□□ -0.07
LSM4-203ENST00000593829 CT83Q5H943 113 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms