RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 BOD1L2Q8IYS8 172 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 PPDPFLQ8WWR9 84 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 TSSC4Q9Y5U2 329 aaPredicted RBP10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 CACNA1AO00555 2505 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 H3BMM0 161 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 COX8AP10176 69 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 DAD1P61803 113 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 UBE2WQ96B02 151 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 SPXQ9BT56 116 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
SMARCA4-216ENST00000591545 UTRNP46939 3433 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 ZNF524Q96C55 264 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 SPRY4Q9C004 299 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 IGHV4-30-2A0A087WSY4 118 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 A0A087WWL8 130 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 PRR31Q5SQ13 230 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 OTOGLQ3ZCN5 2332 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 F8W1H4 67 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 SLAQ13239 276 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 ZNF726P1Q15940 193 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 NDUFA4O00483 81 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 IGFL4Q6B9Z1 124 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 PRORYQ9H606 182 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 MALRD1Q5VYJ5 2156 aa10.6□□□□□ -0.71
SMARCA4-216ENST00000591545 C22orf46C9J442 243 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 I3L3M4 83 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 SRSF2Q01130 221 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 GAGE2AQ6NT46 116 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 XCL2Q9UBD3 114 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 H3BRN7 92 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 HEATR5AQ86XA9 2040 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 CDK2AP2O75956 126 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 C10orf105Q8TEF2 133 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 YLPM1P49750 1951 aaKnown RBP10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 ARFGEF3Q5TH69 2177 aa10.59□□□□□ -0.71
SMARCA4-216ENST00000591545 UTF1Q5T230 341 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 A0A1W2PNU3 283 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 H3BUA1 57 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 SOCS3O14543 225 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 SIVA1O15304 175 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 IGHV4-59P01825 116 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 Q6ZWC4 215 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 F5H768 121 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 K7EP34 96 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 PRB4P10163 310 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 MRPL51Q4U2R6 128 aaKnown RBP10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 EDA2RQ9HAV5 297 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 C2orf16Q68DN1 1984 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 IGKV1-39P01597 117 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 IGKV1D-39P04432 117 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 THAP8Q8NA92 274 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 PRR25Q96S07 402 aa10.58□□□□□ -0.72
SMARCA4-216ENST00000591545 CYYR1Q96J86 154 aa10.57□□□□□ -0.72
SMARCA4-216ENST00000591545 PYGO2Q9BRQ0 406 aa10.57□□□□□ -0.72
SMARCA4-216ENST00000591545 ZNF48Q96MX3 618 aaPredicted RBP10.57□□□□□ -0.72
SMARCA4-216ENST00000591545 POU2AF1Q16633 256 aa10.57□□□□□ -0.72
SMARCA4-216ENST00000591545 C8orf49Q96NF6 230 aa10.56□□□□□ -0.72
SMARCA4-216ENST00000591545 HLA-DRB4P13762 266 aa10.56□□□□□ -0.72
SMARCA4-216ENST00000591545 HOXB4P17483 251 aaPredicted RBP10.56□□□□□ -0.72
SMARCA4-216ENST00000591545 HLA-DRB4X5D2U9 266 aa10.56□□□□□ -0.72
SMARCA4-216ENST00000591545 DKK1O94907 266 aa10.56□□□□□ -0.72
SMARCA4-216ENST00000591545 IGHV1OR15-1A0A075B7D0 117 aa10.55□□□□□ -0.72
SMARCA4-216ENST00000591545 C20orf78Q9BR46 151 aa10.55□□□□□ -0.72
SMARCA4-216ENST00000591545 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
SMARCA4-216ENST00000591545 FBXL19-AS1Q494R0 122 aa10.55□□□□□ -0.72
SMARCA4-216ENST00000591545 RNF138Q8WVD3 245 aa10.55□□□□□ -0.72
SMARCA4-216ENST00000591545 TRBV25-1A0A075B6N4 114 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 F8VRH5 84 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 NPSP0C0P6 89 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 IGLL1P15814 213 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 RSPO1Q2MKA7 263 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 SMIM2Q9BVW6 85 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 C15orf65H3BRN8 121 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 IGLV3-1P01715 115 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 FAM120AOSQ5T036 256 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 C9orf153Q5TBE3 101 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 WIPF2Q8TF74 440 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 COL4A3Q01955 1670 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 SPG11Q96JI7 2443 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 K7EMI3 77 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 IL15RAQ13261 267 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 C8orf86Q6ZUL3 223 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 C8orf31Q8N9H6 132 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 CTSZQ9UBR2 303 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 NRGNQ92686 78 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
SMARCA4-216ENST00000591545 HIVEP2P31629 2446 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 CCL24O00175 119 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 ZNF114Q8NC26 417 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 K7EP13 123 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 SPINK13Q1W4C9 94 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 BVES-AS1Q5T3Y7 98 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 A0A1W2PPM0 123 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
SMARCA4-216ENST00000591545 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms