RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	NRN1	Q9NPD7	142 aa		9.46	□□□□□ -0.9
NPC1-212	ENST00000591107	PGP	A6NDG6	321 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF253	O75346	499 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	HTN3	P15516	51 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	MEOX2	P50222	304 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	PSG9	Q00887	426 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	IGFL4	Q6B9Z1	124 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	EXOC3-AS1	Q8N2X6	119 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107		Q8N3U1	123 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	POM121L12	Q8N7R1	296 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF331	Q9NQX6	463 aa	Predicted RBP	9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	OTOR	Q9NRC9	128 aa		9.45	□□□□□ -0.9
NPC1-212	ENST00000591107	TRAV8-2	A0A0B4J237	113 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107		C9JQL5	133 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107		F6UB75	175 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	SLC25A5	P05141	298 aa	Known RBP	9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	SRP19	P09132	144 aa	Known RBP	9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	HLA-DRB4	P13762	266 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	UQCC3	Q6UW78	93 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	LINC00336	Q6ZUF6	198 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF575	Q86XF7	245 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	LYPD1	Q8N2G4	141 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	EIF4E3	Q8N5X7	224 aa	Known RBP	9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	C16orf92	Q96LL3	132 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	LINC00052	Q96N35	136 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	TXNDC17	Q9BRA2	123 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	NDUFAF3	Q9BU61	184 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	SLC35B3	Q9H1N7	401 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	AAMDC	Q9H7C9	122 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	RPH3AL	Q9UNE2	315 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107	HLA-DRB4	X5D2U9	266 aa		9.44	□□□□□ -0.9
NPC1-212	ENST00000591107		F6UZH7	168 aa		9.43	□□□□□ -0.9
NPC1-212	ENST00000591107	SOCS3	O14543	225 aa		9.43	□□□□□ -0.9
NPC1-212	ENST00000591107	SNRPD3	P62318	126 aa	Known RBP	9.43	□□□□□ -0.9
NPC1-212	ENST00000591107	GNG5	P63218	68 aa		9.43	□□□□□ -0.9
NPC1-212	ENST00000591107	UBE2DNL	Q8IWF7	75 aa		9.43	□□□□□ -0.9
NPC1-212	ENST00000591107	CCDC28A	Q8IWP9	274 aa		9.43	□□□□□ -0.9
NPC1-212	ENST00000591107	NKX6-2	Q9C056	277 aa	Predicted RBP	9.43	□□□□□ -0.9
NPC1-212	ENST00000591107	LRP1B	Q9NZR2	4599 aa		9.43	□□□□□ -0.9
NPC1-212	ENST00000591107		M0R3E3	92 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	PDE6D	O43924	150 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107		P0DMU3	169 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	FAM231A	P0DMU4	169 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	FAM231C	P0DMU5	169 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	PRB4	P10163	310 aa	Predicted RBP	9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	CEBPG	P53567	150 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	FAM222A	Q5U5X8	452 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF705A	Q6ZN79	300 aa	Predicted RBP	9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	RNF182	Q8N6D2	247 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	C5orf17	Q8NAS9	161 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	OR4B1	Q8NGF8	309 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	CMTM2	Q8TAZ6	248 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	KRTAP4-5	Q9BYR2	181 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	SMDT1	Q9H4I9	107 aa		9.42	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF705F	A8MVS1	300 aa	Predicted RBP	9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	ISLR	O14498	428 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF705D	P0CH99	300 aa	Predicted RBP	9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF705B	P0CI00	300 aa	Predicted RBP	9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	ID1	P41134	155 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	SAMD13	Q5VXD3	122 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	CYB561D1	Q8N8Q1	229 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	C20orf173	Q96LM9	149 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	C1QTNF4	Q9BXJ3	329 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	EPDR1	Q9UM22	224 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	PRELID1	Q9Y255	219 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	NACA	E9PAV3	2078 aa		9.41	□□□□□ -0.9
NPC1-212	ENST00000591107	TMEM250	H0YL14	139 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	PEX7	O00628	323 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	NDUFS6	O75380	124 aa	Known RBP	9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	PRM2	P04554	102 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	SFTA3	P0C7M3	94 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	AKR1C3	P42330	323 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	CSN1S1	P47710	185 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	NUTF2	P61970	127 aa	Known RBP	9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	PSG3	Q16557	428 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	ZNF738	Q8NE65	137 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	C11orf52	Q96A22	123 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	RPUSD4	Q96CM3	377 aa	Known RBP	9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	TCEAL7	Q9BRU2	100 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	SAV1	Q9H4B6	383 aa	Predicted RBP	9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	DKK2	Q9UBU2	259 aa		9.4	□□□□□ -0.9
NPC1-212	ENST00000591107	TMEM218	A2RU14	115 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	TCRA	P04437	139 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	SPART-AS1	P0CW21	52 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	MED14OS	P0DP75	135 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	GOLT1A	Q6ZVE7	132 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	C1orf158	Q8N1D5	194 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	HIST1H2BA	Q96A08	127 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	MRPL53	Q96EL3	112 aa	Known RBP	9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	ATG101	Q9BSB4	218 aa		9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	APOB	P04114	4563 aa	Known RBP	9.39	□□□□□ -0.91
NPC1-212	ENST00000591107	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	DIRC3	C9JPN6	131 aa		9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	PRAC2	D3DTV9	90 aa		9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	IGKV2D-40	P01614	121 aa	Predicted RBP	9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	ZNF674	Q2M3X9	581 aa		9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	TMEM88	Q6PEY1	159 aa		9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	FOXI2	Q6ZQN5	318 aa		9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	DERL1	Q9BUN8	251 aa		9.38	□□□□□ -0.91
NPC1-212	ENST00000591107	PARL	Q9H300	379 aa		9.38	□□□□□ -0.91

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