RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 UBE2G1P62253 170 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 C9orf47Q6ZRZ4 202 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 LINC00477Q96M19 166 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 CTDSP1Q9GZU7 261 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 UBE2CO00762 179 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 RPL35AP18077 110 aaKnown RBP12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 HIST1H1AQ02539 215 aaPredicted RBP12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 OR4B1Q8NGF8 309 aa12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 RNASE7Q9H1E1 156 aaKnown RBP12.54□□□□□ -0.4
RPRD1A-209ENST00000590898 SERTM2A0A1B0GWG4 89 aa12.53□□□□□ -0.4
RPRD1A-209ENST00000590898 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
RPRD1A-209ENST00000590898 NBEAL2Q6ZNJ1 2754 aa12.53□□□□□ -0.4
RPRD1A-209ENST00000590898 NPIPB6E9PJ23 425 aa12.52□□□□□ -0.4
RPRD1A-209ENST00000590898 ZNF705DP0CH99 300 aaPredicted RBP12.52□□□□□ -0.4
RPRD1A-209ENST00000590898 ZNF705BP0CI00 300 aaPredicted RBP12.52□□□□□ -0.4
RPRD1A-209ENST00000590898 ANAPC16Q96DE5 110 aa12.52□□□□□ -0.4
RPRD1A-209ENST00000590898 B9D2Q9BPU9 175 aa12.52□□□□□ -0.4
RPRD1A-209ENST00000590898 GCGP01275 180 aa12.52□□□□□ -0.41
RPRD1A-209ENST00000590898 AMTNQ6UX39 209 aa12.52□□□□□ -0.41
RPRD1A-209ENST00000590898 Q86TA4 180 aa12.52□□□□□ -0.41
RPRD1A-209ENST00000590898 FMC1Q96HJ9 113 aa12.52□□□□□ -0.41
RPRD1A-209ENST00000590898 ODF3Q96PU9 254 aa12.52□□□□□ -0.41
RPRD1A-209ENST00000590898 PPP1R14DQ9NXH3 145 aa12.52□□□□□ -0.41
RPRD1A-209ENST00000590898 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 LTAP01374 205 aa12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 IGKV2D-40P01614 121 aaPredicted RBP12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 PFN1P07737 140 aaKnown RBP12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 ERVFC1-1P60608 527 aa12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 OR10G8Q8NGN5 311 aa12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 AGPAT4-IT1Q9H0P7 198 aa12.51□□□□□ -0.41
RPRD1A-209ENST00000590898 K7EQM0 130 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 RAB5AP20339 215 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 PRR27Q6MZM9 219 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 DNAH9Q9NYC9 4486 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 FAM3BP58499 235 aaPredicted RBP12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 TMEM78Q5T7P6 136 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 Q6ZWC4 215 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 VGLL1Q99990 258 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 MLST8Q9BVC4 326 aa12.5□□□□□ -0.41
RPRD1A-209ENST00000590898 TRBV7-9A0A0J9YWB2 115 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 AMBPP02760 352 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 GIG44P09565 113 aaPredicted RBP12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 V9GYV3 84 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 CT45A10P0DMU9 189 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 TSPOP30536 169 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 ERCC8Q13216 396 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
RPRD1A-209ENST00000590898 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
RPRD1A-209ENST00000590898 CA1P00915 261 aaPredicted RBP12.48□□□□□ -0.41
RPRD1A-209ENST00000590898 ZNF138P52744 262 aa12.48□□□□□ -0.41
RPRD1A-209ENST00000590898 FLI1Q01543 452 aaPredicted RBP12.48□□□□□ -0.41
RPRD1A-209ENST00000590898 IBA57Q5T440 356 aaKnown RBP12.48□□□□□ -0.41
RPRD1A-209ENST00000590898 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
RPRD1A-209ENST00000590898 PPP1R2P9O14990 202 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 CDKN1BP46527 198 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 FAM19A4Q96LR4 140 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 S100A9P06702 114 aaKnown RBP12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 ZFP82Q8N141 532 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 Q8TAT8 98 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 OSTCQ9NRP0 149 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
RPRD1A-209ENST00000590898 CRISP2P16562 243 aa12.46□□□□□ -0.42
RPRD1A-209ENST00000590898 TMEM183AQ8IXX5 376 aa12.46□□□□□ -0.42
RPRD1A-209ENST00000590898 CSNK1G2-AS1Q8NCQ2 148 aa12.46□□□□□ -0.42
RPRD1A-209ENST00000590898 FAM210BQ96KR6 192 aa12.46□□□□□ -0.42
RPRD1A-209ENST00000590898 C8orf49Q96NF6 230 aa12.46□□□□□ -0.42
RPRD1A-209ENST00000590898 XCL2Q9UBD3 114 aa12.46□□□□□ -0.42
RPRD1A-209ENST00000590898 COL7A1Q02388 2944 aa12.46□□□□□ -0.42
RPRD1A-209ENST00000590898 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 S100PP25815 95 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 LEPP41159 167 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 RPS10P46783 165 aaKnown RBP12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 SPINK13Q1W4C9 94 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 NUDT10Q8NFP7 164 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 NUDT11Q96G61 164 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 ZC2HC1AQ96GY0 325 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 M0R2Z0 102 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 RNF183Q96D59 192 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 SPATA25Q9BR10 227 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 PYGO2Q9BRQ0 406 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 IL36BQ9NZH7 164 aa12.45□□□□□ -0.42
RPRD1A-209ENST00000590898 TRBV6-1A0A0K0K1D8 114 aa12.44□□□□□ -0.42
RPRD1A-209ENST00000590898 ZNF705GA8MUZ8 300 aaPredicted RBP12.44□□□□□ -0.42
RPRD1A-209ENST00000590898 CRXO43186 299 aaPredicted RBP12.44□□□□□ -0.42
RPRD1A-209ENST00000590898 FXYD7P58549 80 aa12.44□□□□□ -0.42
RPRD1A-209ENST00000590898 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
RPRD1A-209ENST00000590898 ZMAT4Q9H898 229 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms