RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 C18orf15Q96N68 181 aa14.34□□□□□ -0.11
CIRBP-226ENST00000590171 OTORQ9NRC9 128 aa14.34□□□□□ -0.11
CIRBP-226ENST00000590171 TRGV1A0A0A0MS02 117 aa14.33□□□□□ -0.12
CIRBP-226ENST00000590171 PGPA6NDG6 321 aa14.33□□□□□ -0.12
CIRBP-226ENST00000590171 SPINK4O60575 86 aa14.33□□□□□ -0.12
CIRBP-226ENST00000590171 GIPP09681 153 aaPredicted RBP14.33□□□□□ -0.12
CIRBP-226ENST00000590171 CCL18P55774 89 aa14.33□□□□□ -0.12
CIRBP-226ENST00000590171 OR2G3Q8NGZ4 309 aa14.33□□□□□ -0.12
CIRBP-226ENST00000590171 TRGV2A0A075B6R0 118 aa14.32□□□□□ -0.12
CIRBP-226ENST00000590171 RPH3ALQ9UNE2 315 aa14.32□□□□□ -0.12
CIRBP-226ENST00000590171 LENEPQ9Y5L5 61 aa14.32□□□□□ -0.12
CIRBP-226ENST00000590171 H3BNG1 76 aa14.31□□□□□ -0.12
CIRBP-226ENST00000590171 ATP6V0CP27449 155 aa14.31□□□□□ -0.12
CIRBP-226ENST00000590171 CDC34P49427 236 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-226ENST00000590171 FAM74A1Q5RGS3 127 aa14.31□□□□□ -0.12
CIRBP-226ENST00000590171 SSX7Q7RTT5 188 aa14.31□□□□□ -0.12
CIRBP-226ENST00000590171 CMTM2Q8TAZ6 248 aa14.31□□□□□ -0.12
CIRBP-226ENST00000590171 ARPC5LQ9BPX5 153 aa14.31□□□□□ -0.12
CIRBP-226ENST00000590171 PSMG3Q9BT73 122 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-226ENST00000590171 ARL14EPLP0DKL9 152 aa14.3□□□□□ -0.12
CIRBP-226ENST00000590171 MUC21Q5SSG8 566 aa14.3□□□□□ -0.12
CIRBP-226ENST00000590171 Q6AWC8 147 aa14.3□□□□□ -0.12
CIRBP-226ENST00000590171 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
CIRBP-226ENST00000590171 ASB13Q8WXK3 278 aa14.3□□□□□ -0.12
CIRBP-226ENST00000590171 MRPL16Q9NX20 251 aaKnown RBP14.3□□□□□ -0.12
CIRBP-226ENST00000590171 NBDYA0A0U1RRE5 68 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 STAG3L2P0CL84 134 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 STAG3L3P0CL85 134 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 C1orf134Q5TEV5 83 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 GOLT1AQ6ZVE7 132 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 VSIG2Q96IQ7 327 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 SH3BGRL3Q9H299 93 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 HERC2O95714 4834 aa14.29□□□□□ -0.12
CIRBP-226ENST00000590171 RNF222A6NCQ9 220 aa14.28□□□□□ -0.12
CIRBP-226ENST00000590171 GNG5P63218 68 aa14.28□□□□□ -0.12
CIRBP-226ENST00000590171 ZNF415Q09FC8 603 aa14.28□□□□□ -0.12
CIRBP-226ENST00000590171 SOHLH1Q5JUK2 328 aa14.28□□□□□ -0.12
CIRBP-226ENST00000590171 ARL6IP6Q8N6S5 226 aa14.28□□□□□ -0.12
CIRBP-226ENST00000590171 RAB24Q969Q5 203 aa14.28□□□□□ -0.12
CIRBP-226ENST00000590171 TRAV8-1A0A0A6YYK1 113 aa14.27□□□□□ -0.13
CIRBP-226ENST00000590171 ST6GAL2Q96JF0 529 aa14.27□□□□□ -0.13
CIRBP-226ENST00000590171 MDFICQ9P1T7 246 aa14.27□□□□□ -0.13
CIRBP-226ENST00000590171 PKD1P98161 4303 aa14.26□□□□□ -0.13
CIRBP-226ENST00000590171 FXYD6-FXYD2A0A087WZ82 144 aa14.26□□□□□ -0.13
CIRBP-226ENST00000590171 SERF2P84101 59 aa14.26□□□□□ -0.13
CIRBP-226ENST00000590171 ESRGQ1W209 222 aa14.26□□□□□ -0.13
CIRBP-226ENST00000590171 INO80EQ8NBZ0 244 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-226ENST00000590171 TVP23CQ96ET8 276 aa14.26□□□□□ -0.13
CIRBP-226ENST00000590171 TNFSF18Q9UNG2 199 aa14.26□□□□□ -0.13
CIRBP-226ENST00000590171 A0A096LPF7 62 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 IGHV3-53P01767 116 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 MBP02144 154 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 GCHFRP30047 84 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 RPL7L1Q6DKI1 246 aaKnown RBP14.25□□□□□ -0.13
CIRBP-226ENST00000590171 FAM159AQ6UWV7 190 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 OR2T35Q8NGX2 323 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 SUN5Q8TC36 379 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 KIAA1109Q2LD37 5005 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 DYNC1H1Q14204 4646 aaKnown RBP14.25□□□□□ -0.13
CIRBP-226ENST00000590171 DNAH11Q96DT5 4516 aa14.25□□□□□ -0.13
CIRBP-226ENST00000590171 F6UZH7 168 aa14.24□□□□□ -0.13
CIRBP-226ENST00000590171 TMEM183BQ1AE95 376 aa14.24□□□□□ -0.13
CIRBP-226ENST00000590171 TMEM183AQ8IXX5 376 aa14.24□□□□□ -0.13
CIRBP-226ENST00000590171 Q9H8V8 135 aa14.24□□□□□ -0.13
CIRBP-226ENST00000590171 PKHD1P08F94 4074 aa14.23□□□□□ -0.13
CIRBP-226ENST00000590171 TRGV11A0A075B6L2 103 aa14.23□□□□□ -0.13
CIRBP-226ENST00000590171 G3V3Q6 166 aa14.23□□□□□ -0.13
CIRBP-226ENST00000590171 UPK3BQ9BT76 320 aa14.23□□□□□ -0.13
CIRBP-226ENST00000590171 TREM1Q9NP99 234 aa14.23□□□□□ -0.13
CIRBP-226ENST00000590171 NAGKQ9UJ70 344 aa14.23□□□□□ -0.13
CIRBP-226ENST00000590171 MRPS16Q9Y3D3 137 aaKnown RBP14.23□□□□□ -0.13
CIRBP-226ENST00000590171 TDRG1Q3Y452 100 aa14.22□□□□□ -0.13
CIRBP-226ENST00000590171 C6orf223Q8N319 242 aa14.22□□□□□ -0.13
CIRBP-226ENST00000590171 C5orf17Q8NAS9 161 aa14.22□□□□□ -0.13
CIRBP-226ENST00000590171 SGK494Q96LW2 274 aa14.22□□□□□ -0.13
CIRBP-226ENST00000590171 ACTR3CQ9C0K3 210 aaPredicted RBP14.22□□□□□ -0.13
CIRBP-226ENST00000590171 BORCS7-ASMTA0A0B4J1R7 106 aa14.21□□□□□ -0.13
CIRBP-226ENST00000590171 TRAV21A0A0B4J279 112 aa14.21□□□□□ -0.13
CIRBP-226ENST00000590171 CXorf1O96002 111 aa14.21□□□□□ -0.13
CIRBP-226ENST00000590171 TCRAP04437 139 aa14.21□□□□□ -0.13
CIRBP-226ENST00000590171 FHL2Q14192 279 aa14.21□□□□□ -0.13
CIRBP-226ENST00000590171 KRTAP1-5Q9BYS1 174 aa14.21□□□□□ -0.13
CIRBP-226ENST00000590171 TMEM167BQ9NRX6 74 aa14.21□□□□□ -0.13
CIRBP-226ENST00000590171 SERTM2A0A1B0GWG4 89 aa14.2□□□□□ -0.14
CIRBP-226ENST00000590171 GGTLC3B5MD39 225 aa14.2□□□□□ -0.14
CIRBP-226ENST00000590171 PAX4O43316 350 aa14.2□□□□□ -0.14
CIRBP-226ENST00000590171 GNRH2O43555 120 aa14.2□□□□□ -0.14
CIRBP-226ENST00000590171 SPXQ9BT56 116 aa14.2□□□□□ -0.14
CIRBP-226ENST00000590171 PRO0255Q9UI72 69 aa14.2□□□□□ -0.14
CIRBP-226ENST00000590171 CRYBA4P53673 196 aa14.19□□□□□ -0.14
CIRBP-226ENST00000590171 SUMO1P63165 101 aaKnown RBP14.19□□□□□ -0.14
CIRBP-226ENST00000590171 TNP2Q05952 138 aa14.19□□□□□ -0.14
CIRBP-226ENST00000590171 ZNF726P1Q15940 193 aa14.19□□□□□ -0.14
CIRBP-226ENST00000590171 RASL10AQ92737 203 aa14.19□□□□□ -0.14
CIRBP-226ENST00000590171 C8orf49Q96NF6 230 aa14.19□□□□□ -0.14
CIRBP-226ENST00000590171 HHLA3Q9XRX5 114 aa14.19□□□□□ -0.14
CIRBP-226ENST00000590171 ICOSQ9Y6W8 199 aa14.19□□□□□ -0.14
CIRBP-226ENST00000590171 IGHV3-16A0A0C4DH30 117 aa14.18□□□□□ -0.14
CIRBP-226ENST00000590171 TYMSP04818 313 aa14.18□□□□□ -0.14
CIRBP-226ENST00000590171 SFTA3P0C7M3 94 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms