RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ZNF493Q6ZR52 646 aa15.27■□□□□ 0.04
ATG4D-212ENST00000590096 TMEM263Q8WUH6 116 aaKnown RBP15.27■□□□□ 0.04
ATG4D-212ENST00000590096 HIST1H2BAQ96A08 127 aa15.27■□□□□ 0.04
ATG4D-212ENST00000590096 SGK494Q96LW2 274 aa15.27■□□□□ 0.04
ATG4D-212ENST00000590096 CSMD3Q7Z407 3707 aa15.26■□□□□ 0.03
ATG4D-212ENST00000590096 PAGE4O60829 102 aa15.26■□□□□ 0.03
ATG4D-212ENST00000590096 FAM222AQ5U5X8 452 aa15.26■□□□□ 0.03
ATG4D-212ENST00000590096 TMEM75Q8N9X5 138 aa15.26■□□□□ 0.03
ATG4D-212ENST00000590096 PHLDA1Q8WV24 401 aaPredicted RBP15.26■□□□□ 0.03
ATG4D-212ENST00000590096 TCEAL7Q9BRU2 100 aa15.26■□□□□ 0.03
ATG4D-212ENST00000590096 TREM1Q9NP99 234 aa15.26■□□□□ 0.03
ATG4D-212ENST00000590096 DKK2Q9UBU2 259 aa15.26■□□□□ 0.03
ATG4D-212ENST00000590096 STARD9Q9P2P6 4700 aa15.25■□□□□ 0.03
ATG4D-212ENST00000590096 F6UZH7 168 aa15.25■□□□□ 0.03
ATG4D-212ENST00000590096 PEX7O00628 323 aa15.25■□□□□ 0.03
ATG4D-212ENST00000590096 RGS13O14921 159 aa15.25■□□□□ 0.03
ATG4D-212ENST00000590096 FLI1Q01543 452 aaPredicted RBP15.25■□□□□ 0.03
ATG4D-212ENST00000590096 PSG8Q9UQ74 426 aa15.25■□□□□ 0.03
ATG4D-212ENST00000590096 TRAV1-1A0A0B4J248 108 aa15.24■□□□□ 0.03
ATG4D-212ENST00000590096 CEMP1Q6PRD7 247 aaPredicted RBP15.24■□□□□ 0.03
ATG4D-212ENST00000590096 EIF4E3Q8N5X7 224 aaKnown RBP15.24■□□□□ 0.03
ATG4D-212ENST00000590096 RNASE8Q8TDE3 154 aaKnown RBP15.24■□□□□ 0.03
ATG4D-212ENST00000590096 BOLA1Q9Y3E2 137 aa15.24■□□□□ 0.03
ATG4D-212ENST00000590096 CBY3A6NI87 242 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 LYRM9A8MSI8 78 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 C11orf94C9JXX5 98 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 ATP5G3P48201 142 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 C12orf74Q32Q52 190 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 Q6AWC8 147 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 ALKAL2Q6UX46 152 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 Q6ZTC4 211 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 ZNF767PQ75MW2 155 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 PRNTQ86SH4 94 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 LINC00467Q9BRT7 94 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 MANBALQ9NQG1 85 aa15.23■□□□□ 0.03
ATG4D-212ENST00000590096 KLK5Q9Y337 293 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-212ENST00000590096 TRAV34A0A0B4J273 112 aa15.22■□□□□ 0.03
ATG4D-212ENST00000590096 IGLV2-11P01706 119 aa15.22■□□□□ 0.03
ATG4D-212ENST00000590096 ZNF680Q8NEM1 530 aa15.22■□□□□ 0.03
ATG4D-212ENST00000590096 TVP23CQ96ET8 276 aa15.22■□□□□ 0.03
ATG4D-212ENST00000590096 TIMM8BQ9Y5J9 83 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-212ENST00000590096 IGHV1OR15-1A0A075B7D0 117 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 PLAC8L1A1L4L8 177 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 SNURFLB1AK76 121 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 DAD1P61803 113 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 ANXA2RQ3ZCQ2 193 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 SAPCD1Q5SSQ6 148 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 LINC00479Q96M42 142 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 GNG13Q9P2W3 67 aa15.21■□□□□ 0.03
ATG4D-212ENST00000590096 TRAV10A0A0B4J240 114 aa15.2■□□□□ 0.02
ATG4D-212ENST00000590096 TRAV21A0A0B4J279 112 aa15.2■□□□□ 0.02
ATG4D-212ENST00000590096 AKR1C3P42330 323 aa15.2■□□□□ 0.02
ATG4D-212ENST00000590096 UBE2G1P62253 170 aa15.2■□□□□ 0.02
ATG4D-212ENST00000590096 CCL20P78556 96 aa15.2■□□□□ 0.02
ATG4D-212ENST00000590096 Q6ZQT7 251 aa15.2■□□□□ 0.02
ATG4D-212ENST00000590096 IFNA1P01562 189 aa15.19■□□□□ 0.02
ATG4D-212ENST00000590096 SMUG1Q53HV7 270 aa15.19■□□□□ 0.02
ATG4D-212ENST00000590096 FAM159AQ6UWV7 190 aa15.19■□□□□ 0.02
ATG4D-212ENST00000590096 FMC1Q96HJ9 113 aa15.19■□□□□ 0.02
ATG4D-212ENST00000590096 C8orf49Q96NF6 230 aa15.19■□□□□ 0.02
ATG4D-212ENST00000590096 NOP10Q9NPE3 64 aaKnown RBP15.19■□□□□ 0.02
ATG4D-212ENST00000590096 BLOC1S1P78537 153 aa15.18■□□□□ 0.02
ATG4D-212ENST00000590096 MUC21Q5SSG8 566 aa15.18■□□□□ 0.02
ATG4D-212ENST00000590096 Q86TA4 180 aa15.18■□□□□ 0.02
ATG4D-212ENST00000590096 C2CD4CQ8TF44 421 aa15.18■□□□□ 0.02
ATG4D-212ENST00000590096 NAGKQ9UJ70 344 aa15.18■□□□□ 0.02
ATG4D-212ENST00000590096 DEFB131BA0A096LNP1 70 aa15.17■□□□□ 0.02
ATG4D-212ENST00000590096 GCGP01275 180 aa15.17■□□□□ 0.02
ATG4D-212ENST00000590096 DEFB130BP0DP73 79 aa15.17■□□□□ 0.02
ATG4D-212ENST00000590096 DEFB130AP0DP74 79 aa15.17■□□□□ 0.02
ATG4D-212ENST00000590096 TXNDC17Q9BRA2 123 aa15.17■□□□□ 0.02
ATG4D-212ENST00000590096 DYNC2H1Q8NCM8 4307 aaKnown RBP15.16■□□□□ 0.02
ATG4D-212ENST00000590096 GSN-AS1Q9NRJ2 163 aa15.16■□□□□ 0.02
ATG4D-212ENST00000590096 TP53TG3Q9ULZ0 132 aa15.16■□□□□ 0.02
ATG4D-212ENST00000590096 KLF12Q9Y4X4 402 aa15.16■□□□□ 0.02
ATG4D-212ENST00000590096 TRGV11A0A075B6L2 103 aa15.15■□□□□ 0.02
ATG4D-212ENST00000590096 SCO2A0A1W2PP80 73 aa15.15■□□□□ 0.02
ATG4D-212ENST00000590096 TMEM183BQ1AE95 376 aa15.15■□□□□ 0.02
ATG4D-212ENST00000590096 IBA57Q5T440 356 aaKnown RBP15.15■□□□□ 0.02
ATG4D-212ENST00000590096 C11orf72Q8NBR9 251 aa15.15■□□□□ 0.02
ATG4D-212ENST00000590096 ZFP30Q9Y2G7 519 aa15.15■□□□□ 0.02
ATG4D-212ENST00000590096 TENM2Q9NT68 2774 aa15.15■□□□□ 0.02
ATG4D-212ENST00000590096 S100A9P06702 114 aaKnown RBP15.14■□□□□ 0.01
ATG4D-212ENST00000590096 PFN1P07737 140 aaKnown RBP15.14■□□□□ 0.01
ATG4D-212ENST00000590096 ZNF415Q09FC8 603 aa15.14■□□□□ 0.01
ATG4D-212ENST00000590096 DAZ2Q13117 558 aaKnown RBP15.14■□□□□ 0.01
ATG4D-212ENST00000590096 KCNS1Q96KK3 526 aa15.14■□□□□ 0.01
ATG4D-212ENST00000590096 TRBV6-1A0A0K0K1D8 114 aa15.13■□□□□ 0.01
ATG4D-212ENST00000590096 IGLL5B9A064 214 aa15.13■□□□□ 0.01
ATG4D-212ENST00000590096 HTN3P15516 51 aa15.13■□□□□ 0.01
ATG4D-212ENST00000590096 ZNF80P51504 273 aaPredicted RBP15.13■□□□□ 0.01
ATG4D-212ENST00000590096 TCL1AP56279 114 aa15.13■□□□□ 0.01
ATG4D-212ENST00000590096 TDRG1Q3Y452 100 aa15.13■□□□□ 0.01
ATG4D-212ENST00000590096 TMEM183AQ8IXX5 376 aa15.13■□□□□ 0.01
ATG4D-212ENST00000590096 PLECQ15149 4684 aaKnown RBP15.12■□□□□ 0.01
ATG4D-212ENST00000590096 BCL2P10415 239 aa15.12■□□□□ 0.01
ATG4D-212ENST00000590096 TAGLN2P37802 199 aaKnown RBP15.12■□□□□ 0.01
ATG4D-212ENST00000590096 SDF2L1Q9HCN8 221 aa15.12■□□□□ 0.01
ATG4D-212ENST00000590096 LTAP01374 205 aa15.11■□□□□ 0.01
ATG4D-212ENST00000590096 MEF2BQ02080 365 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms