RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 PRNDQ9UKY0 176 aa5.73□□□□□ -1.49
SMAD4-209ENST00000589941 C20orf202A1L168 122 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 GRIFINA4D1Z8 144 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF705FA8MVS1 300 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-209ENST00000589941 UPK2O00526 184 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 FCN1O00602 326 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 OR2J3O76001 311 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 CA2P00918 260 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF705DP0CH99 300 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF705BP0CI00 300 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-209ENST00000589941 EDN2P20800 178 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 KLF5Q13887 457 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-209ENST00000589941 HES1Q14469 280 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 EDDM3AQ14507 147 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 CENPWQ5EE01 88 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 CT45A1Q5HYN5 189 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 OR4A47Q6IF82 309 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 C19orf35Q6ZS72 473 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 ABHD12Q8N2K0 398 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 OR5T1Q8NG75 326 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 CT45A3Q8NHU0 189 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 PHLDA1Q8WV24 401 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-209ENST00000589941 SMIM12Q96EX1 92 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 KCNS1Q96KK3 526 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 VAMP8Q9BV40 100 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 ZNF586Q9NXT0 402 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 BET1LQ9NYM9 111 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 GNG12Q9UBI6 72 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 PEMTQ9UBM1 199 aa5.72□□□□□ -1.49
SMAD4-209ENST00000589941 IGHV4-28A0A0C4DH34 117 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 KBTBD11-OT1A0A1B0GTJ5 212 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 A0A1W2PS18 150 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 SNURFLB1AK76 121 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 GGTLC3B5MD39 225 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 F2Z2F3 143 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 BMPR1BO00238 502 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 SLC17A3O00476 420 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF253O75346 499 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF324O75467 553 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-209ENST00000589941 SAA2P0DJI9 122 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-209ENST00000589941 RNASE2P10153 161 aaKnown RBP5.71□□□□□ -1.5
SMAD4-209ENST00000589941 AMTP48728 403 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 GNG4P50150 75 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 PRRX1P54821 245 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 TAS2R45P59539 299 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 TDRG1Q3Y452 100 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 RPL39P5Q59GN2 51 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 PVRIGQ6DKI7 326 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 MIR17HGQ75NE6 70 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 NIT1Q86X76 327 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 DEFB125Q8N687 156 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 OR5B3Q8NH48 314 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 RFESDQ8TAC1 157 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 CACNG8Q8WXS5 425 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 TMEM190Q8WZ59 177 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 FAM167A-AS1Q96KT0 104 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 UBE2E2Q96LR5 201 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 ATG101Q9BSB4 218 aa5.71□□□□□ -1.5
SMAD4-209ENST00000589941 IGKV1OR2-108A0A075B7D4 117 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 HELTA6NFD8 242 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 LINC01619G3V211 115 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 BUB1B-PAK6H3BSN5 160 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 C8orf88P0DMB2 117 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 IGLC2P0DOY2 106 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 IGLC3P0DOY3 106 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF25P17030 456 aaPredicted RBP5.7□□□□□ -1.5
SMAD4-209ENST00000589941 TIGITQ495A1 244 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 COL5A1-AS1Q5SY13 56 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 FAM71F2Q6NXP2 309 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 SLC25A48Q6ZT89 311 aaKnown RBP5.7□□□□□ -1.5
SMAD4-209ENST00000589941 BAGE3Q86Y29 109 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 BAGE2Q86Y30 109 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 OR8I2Q8N0Y5 310 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 Q8N9W7 124 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 THAP8Q8NA92 274 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF596Q8TC21 504 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 NRN1Q9NPD7 142 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 UQCR10Q9UDW1 63 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 ZFP30Q9Y2G7 519 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 MRPS16Q9Y3D3 137 aaKnown RBP5.7□□□□□ -1.5
SMAD4-209ENST00000589941 GOLT1BQ9Y3E0 138 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 OR51B2Q9Y5P1 312 aa5.7□□□□□ -1.5
SMAD4-209ENST00000589941 A0A1B0GXF2 115 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 TEX22C9J3V5 150 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 G3V318 75 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 CD7P09564 240 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 FAM106CPP0CH98 169 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 CRYBB3P26998 211 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 OR5I1Q13606 314 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 PSG5Q15238 335 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 PMCHL1Q16048 86 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF705AQ6ZN79 300 aaPredicted RBP5.69□□□□□ -1.5
SMAD4-209ENST00000589941 ZNF833PQ6ZTB9 187 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 ATP5L2Q7Z4Y8 100 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 GTSCR1Q86UQ5 136 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 VKORC1L1Q8N0U8 176 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 Q8N6K4 173 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 C8orf31Q8N9H6 132 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 OR4A5Q8NH83 315 aa5.69□□□□□ -1.5
SMAD4-209ENST00000589941 SLC25A2Q9BXI2 301 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms