RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 GCHFRP30047 84 aa10.05□□□□□ -0.8
MBD1-220ENST00000589758 CD300CQ08708 224 aa10.05□□□□□ -0.8
MBD1-220ENST00000589758 ZNF726P1Q15940 193 aa10.05□□□□□ -0.8
MBD1-220ENST00000589758 LINC00612Q8N6U2 182 aa10.05□□□□□ -0.8
MBD1-220ENST00000589758 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
MBD1-220ENST00000589758 PYGO2Q9BRQ0 406 aa10.05□□□□□ -0.8
MBD1-220ENST00000589758 CTXND1A0A1B0GTU2 59 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 CXorf1O96002 111 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 C1QBP02746 253 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 SLC25A5P05141 298 aaKnown RBP10.04□□□□□ -0.8
MBD1-220ENST00000589758 FGF8P55075 233 aaPredicted RBP10.04□□□□□ -0.8
MBD1-220ENST00000589758 OR5I1Q13606 314 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 LGALSLQ3ZCW2 172 aaPredicted RBP10.04□□□□□ -0.8
MBD1-220ENST00000589758 LYPD1Q8N2G4 141 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 LINC00477Q96M19 166 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 VGLL1Q99990 258 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 AGPAT4-IT1Q9H0P7 198 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
MBD1-220ENST00000589758 NBDYA0A0U1RRE5 68 aa10.03□□□□□ -0.8
MBD1-220ENST00000589758 FAM74A1Q5RGS3 127 aa10.03□□□□□ -0.8
MBD1-220ENST00000589758 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
MBD1-220ENST00000589758 GAGE12BA1L429 117 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 GAGE7O76087 117 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.81
MBD1-220ENST00000589758 FHITP49789 147 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 GNG5P63218 68 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 EIF5AP63241 154 aaKnown RBP10.02□□□□□ -0.81
MBD1-220ENST00000589758 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
MBD1-220ENST00000589758 TMEM78Q5T7P6 136 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 C9orf47Q6ZRZ4 202 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 ZNF680Q8NEM1 530 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 Q8TAT8 98 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 RXFP4Q8TDU9 374 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 TMPRSS5Q9H3S3 457 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 TMEM167BQ9NRX6 74 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 KIAA1109Q2LD37 5005 aa10.02□□□□□ -0.81
MBD1-220ENST00000589758 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 C7orf71A4D174 169 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 MAP1LC3B2A6NCE7 125 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 H3BNG1 76 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 SEC11BP0C7V7 166 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 C6orf223Q8N319 242 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 FAM213BQ8TBF2 198 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 TMED6Q8WW62 240 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 MAP1LC3BQ9GZQ8 125 aa10.01□□□□□ -0.81
MBD1-220ENST00000589758 RYR1P21817 5038 aa10□□□□□ -0.81
MBD1-220ENST00000589758 A0A1B0GV50 99 aa10□□□□□ -0.81
MBD1-220ENST00000589758 KLLNB2CW77 178 aa10□□□□□ -0.81
MBD1-220ENST00000589758 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
MBD1-220ENST00000589758 UBE2G2P60604 165 aa10□□□□□ -0.81
MBD1-220ENST00000589758 GOLT1AQ6ZVE7 132 aa10□□□□□ -0.81
MBD1-220ENST00000589758 FAM19A4Q96LR4 140 aa10□□□□□ -0.81
MBD1-220ENST00000589758 ZNF492Q9P255 531 aa10□□□□□ -0.81
MBD1-220ENST00000589758 DNAH11Q96DT5 4516 aa10□□□□□ -0.81
MBD1-220ENST00000589758 RBAKDNA6NC62 111 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
MBD1-220ENST00000589758 GPX1P07203 203 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 NMBP08949 121 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 CRISP2P16562 243 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 HOXA5P20719 270 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 ZNF138P52744 262 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
MBD1-220ENST00000589758 BTN1A1Q13410 526 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 ZFP69Q49AA0 526 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 EIF4E3Q8N5X7 224 aaKnown RBP9.99□□□□□ -0.81
MBD1-220ENST00000589758 SUN5Q8TC36 379 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 Q9H8V8 135 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 PKD1P98161 4303 aa9.99□□□□□ -0.81
MBD1-220ENST00000589758 DYNC1H1Q14204 4646 aaKnown RBP9.99□□□□□ -0.81
MBD1-220ENST00000589758 TRGV2A0A075B6R0 118 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 A0A0J9YY99 117 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 UMAD1C9J7I0 102 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 TTC32Q5I0X7 151 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 PRR9Q5T870 116 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 Q6ZTI0 123 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 STOML3Q8TAV4 291 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 SGK494Q96LW2 274 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 PKHD1P08F94 4074 aa9.98□□□□□ -0.81
MBD1-220ENST00000589758 TRAV8-1A0A0A6YYK1 113 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 GGTLC3B5MD39 225 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 TNP2Q05952 138 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 IBA57Q5T440 356 aaKnown RBP9.97□□□□□ -0.81
MBD1-220ENST00000589758 C9orf62Q8N4C0 152 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 ZFAND2AQ8N6M9 145 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 C11orf72Q8NBR9 251 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 SFT2D1Q8WV19 159 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
MBD1-220ENST00000589758 TRBV7-9A0A0J9YWB2 115 aa9.96□□□□□ -0.82
MBD1-220ENST00000589758 A0A1W2PRE2 83 aa9.96□□□□□ -0.82
MBD1-220ENST00000589758 IFNA7P01567 189 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms