RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RPUSD4Q96CM3 377 aaKnown RBP4.27□□□□□ -1.73
VPS25-204ENST00000589577 MRPL53Q96EL3 112 aaKnown RBP4.27□□□□□ -1.73
VPS25-204ENST00000589577 FAM167A-AS1Q96KT0 104 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 NDFIP1Q9BT67 221 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 Q9H3A6 140 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 ZNF331Q9NQX6 463 aaPredicted RBP4.27□□□□□ -1.73
VPS25-204ENST00000589577 RPH3ALQ9UNE2 315 aa4.27□□□□□ -1.73
VPS25-204ENST00000589577 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 PGPA6NDG6 321 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 H3BTX0 84 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 K7EQG2 157 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 PDE6DO43924 150 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 PAGE4O60829 102 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 BCL2P10415 239 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 AKR1C3P42330 323 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 CNN1P51911 297 aaKnown RBP4.26□□□□□ -1.73
VPS25-204ENST00000589577 DEFB131AP59861 70 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 SUMO1P63165 101 aaKnown RBP4.26□□□□□ -1.73
VPS25-204ENST00000589577 ICAM4Q14773 271 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 PEA15Q15121 130 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 ZNF726P1Q15940 193 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 PSG3Q16557 428 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 CLLU1Q5K131 121 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 TMEM78Q5T7P6 136 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 FAM90A2PQ658T7 463 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 TMEM88Q6PEY1 159 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
VPS25-204ENST00000589577 STHQ8IWL8 128 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 FAM24BQ8N5W8 94 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 ARL6IP6Q8N6S5 226 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 HIST1H2BAQ96A08 127 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 FXYD5Q96DB9 178 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 ZNF586Q9NXT0 402 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 VAX2Q9UIW0 290 aa4.26□□□□□ -1.73
VPS25-204ENST00000589577 RBFOX3A6NFN3 312 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 H3BQ15 152 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 RGS13O14921 159 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 EIF3GO75821 320 aaKnown RBP eCLIP4.25□□□□□ -1.73
VPS25-204ENST00000589577 S100A9P06702 114 aaKnown RBP4.25□□□□□ -1.73
VPS25-204ENST00000589577 NMBP08949 121 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 SNRPCP09234 159 aaKnown RBP4.25□□□□□ -1.73
VPS25-204ENST00000589577 TSPOP30536 169 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 MEF2BQ02080 365 aaPredicted RBP4.25□□□□□ -1.73
VPS25-204ENST00000589577 HIST1H1AQ02539 215 aaPredicted RBP4.25□□□□□ -1.73
VPS25-204ENST00000589577 TOR2AQ5JU69 321 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 FOXI2Q6ZQN5 318 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 Q6ZRN7 208 aaPredicted RBP4.25□□□□□ -1.73
VPS25-204ENST00000589577 CYB561D1Q8N8Q1 229 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 OR4B1Q8NGF8 309 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 ATG101Q9BSB4 218 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 TMPRSS5Q9H3S3 457 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 SMDT1Q9H4I9 107 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
VPS25-204ENST00000589577 RAB19A4D1S5 217 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 RBAKDNA6NC62 111 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 TMEM250H0YL14 139 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 SLC17A3O00476 420 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 PEX7O00628 323 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 MRPS12O15235 138 aaKnown RBP4.24□□□□□ -1.73
VPS25-204ENST00000589577 CT45A10P0DMU9 189 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 CEBPGP53567 150 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 NDUFA5Q16718 116 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 ACTL10Q5JWF8 245 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 GOLT1AQ6ZVE7 132 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 SSX7Q7RTT5 188 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 EXOC3-AS1Q8N2X6 119 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 RNF182Q8N6D2 247 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 OR8A1Q8NGG7 326 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 LINC00477Q96M19 166 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 FAM210AQ96ND0 272 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 C1QTNF4Q9BXJ3 329 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 TREM1Q9NP99 234 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 BIN3Q9NQY0 253 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 MED9Q9NWA0 146 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 PGPEP1Q9NXJ5 209 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 EPDR1Q9UM22 224 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 LINC00588Q9Y4M8 146 aa4.24□□□□□ -1.73
VPS25-204ENST00000589577 LOC102723971A0A1B0GUV8 181 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 GGTLC3B5MD39 225 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 M0R3E3 92 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 SOCS3O14543 225 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 NDUFS6O75380 124 aaKnown RBP4.23□□□□□ -1.73
VPS25-204ENST00000589577 NDUFB4O95168 129 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 TCRAP04437 139 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 SPART-AS1P0CW21 52 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 HLA-DRB4P13762 266 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 HTN3P15516 51 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 LEPP41159 167 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 ZNF506Q5JVG8 444 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 SAPCD1Q5SSQ6 148 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 CDPF1Q6NVV7 123 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 UQCC3Q6UW78 93 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 LYPD6BQ8NI32 183 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 PCNPQ8WW12 178 aaKnown RBP4.23□□□□□ -1.73
VPS25-204ENST00000589577 FMC1Q96HJ9 113 aa4.23□□□□□ -1.73
VPS25-204ENST00000589577 SAV1Q9H4B6 383 aaPredicted RBP4.23□□□□□ -1.73
VPS25-204ENST00000589577 DKK2Q9UBU2 259 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms