RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 H3BMM0 161 aa15.61■□□□□ 0.09
R3HDM4-204ENST00000589428 K7EN84 100 aa15.61■□□□□ 0.09
R3HDM4-204ENST00000589428 LY96Q9Y6Y9 160 aa15.61■□□□□ 0.09
R3HDM4-204ENST00000589428 DUSP14O95147 198 aaKnown RBP15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 IGKV3-20P01619 116 aa15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 RPL23P62829 140 aaKnown RBP15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 TMEM183AQ8IXX5 376 aa15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 OR4B1Q8NGF8 309 aa15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 FAM19A4Q96LR4 140 aa15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 C8orf49Q96NF6 230 aa15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 ADIRFQ15847 76 aa15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 TRPT1Q86TN4 253 aaKnown RBP15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 SMIM12Q96EX1 92 aa15.6■□□□□ 0.09
R3HDM4-204ENST00000589428 A8MTW9 85 aa15.59■□□□□ 0.09
R3HDM4-204ENST00000589428 UBE2CO00762 179 aa15.59■□□□□ 0.09
R3HDM4-204ENST00000589428 SAPCD1Q5SSQ6 148 aa15.59■□□□□ 0.09
R3HDM4-204ENST00000589428 ZC2HC1AQ96GY0 325 aa15.59■□□□□ 0.09
R3HDM4-204ENST00000589428 NDFIP1Q9BT67 221 aa15.59■□□□□ 0.09
R3HDM4-204ENST00000589428 MGST1P10620 155 aaKnown RBP15.58■□□□□ 0.08
R3HDM4-204ENST00000589428 AMTNQ6UX39 209 aa15.58■□□□□ 0.08
R3HDM4-204ENST00000589428 CSTL1Q9H114 145 aa15.58■□□□□ 0.08
R3HDM4-204ENST00000589428 LENEPQ9Y5L5 61 aa15.58■□□□□ 0.08
R3HDM4-204ENST00000589428 PNRC1Q12796 327 aaPredicted RBP15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 COX8CQ7Z4L0 72 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 ODF3Q96PU9 254 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 U3KQK5 164 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 HUWE1Q7Z6Z7 4374 aaKnown RBP15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 COL7A1Q02388 2944 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 OR5I1Q13606 314 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 SVBPQ8N300 66 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 ZFAND2AQ8N6M9 145 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 RCHY1Q96PM5 261 aa15.57■□□□□ 0.08
R3HDM4-204ENST00000589428 TRBV7-9A0A0J9YWB2 115 aa15.56■□□□□ 0.08
R3HDM4-204ENST00000589428 CA1P00915 261 aaPredicted RBP15.56■□□□□ 0.08
R3HDM4-204ENST00000589428 CRISP2P16562 243 aa15.56■□□□□ 0.08
R3HDM4-204ENST00000589428 PRR9Q5T870 116 aa15.56■□□□□ 0.08
R3HDM4-204ENST00000589428 MORN3Q6PF18 240 aaPredicted RBP15.56■□□□□ 0.08
R3HDM4-204ENST00000589428 M0R036 132 aa15.55■□□□□ 0.08
R3HDM4-204ENST00000589428 GCGP01275 180 aa15.55■□□□□ 0.08
R3HDM4-204ENST00000589428 Q6ZWC4 215 aa15.55■□□□□ 0.08
R3HDM4-204ENST00000589428 ISOC2Q96AB3 205 aa15.55■□□□□ 0.08
R3HDM4-204ENST00000589428 RETNQ9HD89 108 aa15.55■□□□□ 0.08
R3HDM4-204ENST00000589428 ZNF80P51504 273 aaPredicted RBP15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 NUTF2P61970 127 aaKnown RBP15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 KIR3DS1Q14943 382 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 DEFB135Q30KP9 77 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 PRR27Q6MZM9 219 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 CLUHP3Q96NS8 147 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 J3KRW8 73 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 M0R2Z0 102 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 SMUG1Q53HV7 270 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 CLRN3Q8NCR9 226 aa15.54■□□□□ 0.08
R3HDM4-204ENST00000589428 KLLNB2CW77 178 aa15.53■□□□□ 0.08
R3HDM4-204ENST00000589428 LEPP41159 167 aa15.53■□□□□ 0.08
R3HDM4-204ENST00000589428 CRIP1P50238 77 aa15.53■□□□□ 0.08
R3HDM4-204ENST00000589428 SPINK13Q1W4C9 94 aa15.53■□□□□ 0.08
R3HDM4-204ENST00000589428 TP53TG1Q9Y2A0 90 aa15.52■□□□□ 0.08
R3HDM4-204ENST00000589428 SNAPINO95295 136 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 FXYD7P58549 80 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 RNASE7Q9H1E1 156 aaKnown RBP15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 SPRY2O43597 315 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 GPX1P07203 203 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 TSPOP30536 169 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 CDKN1BP46527 198 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 BTN1A1Q13410 526 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 ATRAIDQ6UW56 229 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 SFRP2Q96HF1 295 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 BIN3Q9NQY0 253 aa15.51■□□□□ 0.07
R3HDM4-204ENST00000589428 NBEAL2Q6ZNJ1 2754 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 TRAV12-2A0A075B6T6 113 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 C19orf71A6NCJ1 209 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 FAM162BQ5T6X4 162 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 Q6ZQT7 251 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 RNF183Q96D59 192 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 OVOL2Q9BRP0 275 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 C1QTNF4Q9BXJ3 329 aa15.5■□□□□ 0.07
R3HDM4-204ENST00000589428 C7orf77A4D0Y5 90 aa15.49■□□□□ 0.07
R3HDM4-204ENST00000589428 SH2D1AO60880 128 aa15.49■□□□□ 0.07
R3HDM4-204ENST00000589428 RNASE4P34096 147 aaKnown RBP15.49■□□□□ 0.07
R3HDM4-204ENST00000589428 GFI1BQ5VTD9 330 aa15.49■□□□□ 0.07
R3HDM4-204ENST00000589428 B4DEV8 164 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 PFN1P07737 140 aaKnown RBP15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 ERVFC1-1P60608 527 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 RHEBQ15382 184 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 RNF212Q495C1 297 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 IBA57Q5T440 356 aaKnown RBP15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 CRXO43186 299 aaPredicted RBP15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 Q6AWC8 147 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 FAM231DQ6ZW35 169 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 NUDT10Q8NFP7 164 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 NUDT11Q96G61 164 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 TENM3Q9P273 2699 aa15.48■□□□□ 0.07
R3HDM4-204ENST00000589428 C7orf71A4D174 169 aa15.47■□□□□ 0.07
R3HDM4-204ENST00000589428 GIG44P09565 113 aaPredicted RBP15.47■□□□□ 0.07
R3HDM4-204ENST00000589428 OSTCQ9NRP0 149 aa15.47■□□□□ 0.07
R3HDM4-204ENST00000589428 FABP5P3A8MUU1 101 aa15.46■□□□□ 0.07
R3HDM4-204ENST00000589428 XCL2Q9UBD3 114 aa15.46■□□□□ 0.07
R3HDM4-204ENST00000589428 TRAV12-3A0A0B4J271 114 aa15.46■□□□□ 0.06
R3HDM4-204ENST00000589428 P01737 135 aa15.46■□□□□ 0.06
R3HDM4-204ENST00000589428 MT-ND4LP03901 98 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms