RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 HLA-DMBP28068 263 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 HIST1H1AQ02539 215 aaPredicted RBP7.62□□□□□ -1.19
VPS25-202ENST00000589219 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 TMEM78Q5T7P6 136 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 SAMD13Q5VXD3 122 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 NIT1Q86X76 327 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 FER1L6-AS1Q8NA97 138 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 Q8TAT8 98 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 ZNF418Q8TF45 676 aaPredicted RBP7.62□□□□□ -1.19
VPS25-202ENST00000589219 ASCL2Q99929 193 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 VGLL1Q99990 258 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 LINC00527Q9UJ94 153 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 LENEPQ9Y5L5 61 aa7.62□□□□□ -1.19
VPS25-202ENST00000589219 IGHV3-66A0A0C4DH42 116 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 FABP5P3A8MUU1 101 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 M0R2Z0 102 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 AVPP01185 164 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 IGLC6P0CF74 106 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 NTF3P20783 257 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 ZNF138P52744 262 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 KRTDAPP60985 99 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 DEFB112Q30KQ8 113 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 C9orf47Q6ZRZ4 202 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 C16orf92Q96LL3 132 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 C20orf144Q9BQM9 153 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 NDUFAF3Q9BU61 184 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 VAMP8Q9BV40 100 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 NPFFR1Q9GZQ6 430 aa7.61□□□□□ -1.19
VPS25-202ENST00000589219 OVOL1O14753 267 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 ZNF207O43670 478 aaKnown RBP7.6□□□□□ -1.19
VPS25-202ENST00000589219 BLCAPP62952 87 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 IGFL4Q6B9Z1 124 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 C12orf54Q6X4T0 127 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 MRPL52Q86TS9 123 aaKnown RBP7.6□□□□□ -1.19
VPS25-202ENST00000589219 RNF182Q8N6D2 247 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 OR4X2Q8NGF9 303 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 JMJD8Q96S16 334 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 CNFNQ9BYD5 112 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 VPREB3Q9UKI3 123 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 NBEAL1Q6ZS30 2694 aa7.6□□□□□ -1.19
VPS25-202ENST00000589219 WNK2Q9Y3S1 2297 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 TMSB15BA0A087X1C1 80 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 FAM181BA6NEQ2 426 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 PRAC2D3DTV9 90 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 K7EMT4 169 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 TRBV12-3P01733 135 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 IGHV4-59P01825 116 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 OR5AL1P0C617 328 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 C3orf79P0CE67 100 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 ZNF80P51504 273 aaPredicted RBP7.59□□□□□ -1.19
VPS25-202ENST00000589219 ERCC8Q13216 396 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 PMCHL1Q16048 86 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 LBHQ53QV2 105 aaPredicted RBP7.59□□□□□ -1.19
VPS25-202ENST00000589219 Q8N976 141 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 C14orf144Q96I85 54 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 TPPP3Q9BW30 176 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 DAZ1Q9NQZ3 744 aaKnown RBP7.59□□□□□ -1.19
VPS25-202ENST00000589219 RNF114Q9Y508 228 aa7.59□□□□□ -1.19
VPS25-202ENST00000589219 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 IGHV3-49A0A0A0MS15 119 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 IGHV7-4-1A0A0J9YVY3 117 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 TRBV7-9A0A0J9YWB2 115 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 C20orf202A1L168 122 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 SOCS3O14543 225 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 IGHV3-11P01762 117 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 LINC00614P0C842 121 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 BTF3P20290 206 aaKnown RBP7.58□□□□□ -1.2
VPS25-202ENST00000589219 PSMB8P28062 276 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 UNQ9165/PRO28630Q6UXU0 137 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.58□□□□□ -1.2
VPS25-202ENST00000589219 ZNF738Q8NE65 137 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 URB1-AS1Q96HZ7 61 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 AGPAT4-IT1Q9H0P7 198 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 KLK15Q9H2R5 256 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 PEF1Q9UBV8 284 aaKnown RBP7.58□□□□□ -1.2
VPS25-202ENST00000589219 UFC1Q9Y3C8 167 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 U3KQK5 164 aa7.58□□□□□ -1.2
VPS25-202ENST00000589219 IGHV1-24A0A0C4DH33 117 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 ORM1P02763 201 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 HILS1P60008 231 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 FAM106AQ4KMX7 169 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 FA2HQ7L5A8 372 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 GPHB5Q86YW7 130 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 ORMDL3Q8N138 153 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 OR10J6PQ8NGY7 276 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 LINC00477Q96M19 166 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 TMEM191AQ9H0A3 160 aa7.57□□□□□ -1.2
VPS25-202ENST00000589219 ANK2Q01484 3957 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 TMEM213A2RRL7 107 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 PPBPP02775 128 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 ELANEP08246 267 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 PRB4P10163 310 aaPredicted RBP7.56□□□□□ -1.2
VPS25-202ENST00000589219 CD33P20138 364 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 FOXE3Q13461 319 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 Q6YL49 198 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 Q6ZS46 218 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms