RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
DNMT1-217ENST00000589091 LENEPQ9Y5L5 61 aa10.14□□□□□ -0.79
DNMT1-217ENST00000589091 PKD1P98161 4303 aa10.14□□□□□ -0.79
DNMT1-217ENST00000589091 RPL12P30050 165 aaKnown RBP10.13□□□□□ -0.79
DNMT1-217ENST00000589091 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
DNMT1-217ENST00000589091 ZNF415Q09FC8 603 aa10.13□□□□□ -0.79
DNMT1-217ENST00000589091 SLAQ13239 276 aa10.13□□□□□ -0.79
DNMT1-217ENST00000589091 PRR9Q5T870 116 aa10.13□□□□□ -0.79
DNMT1-217ENST00000589091 ST6GAL2Q96JF0 529 aa10.13□□□□□ -0.79
DNMT1-217ENST00000589091 KLF12Q9Y4X4 402 aa10.13□□□□□ -0.79
DNMT1-217ENST00000589091 A0A096LPF7 62 aa10.12□□□□□ -0.79
DNMT1-217ENST00000589091 ZNF266Q14584 549 aa10.12□□□□□ -0.79
DNMT1-217ENST00000589091 FAM74A1Q5RGS3 127 aa10.12□□□□□ -0.79
DNMT1-217ENST00000589091 VSIG2Q96IQ7 327 aa10.12□□□□□ -0.79
DNMT1-217ENST00000589091 KIAA1109Q2LD37 5005 aa10.12□□□□□ -0.79
DNMT1-217ENST00000589091 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
DNMT1-217ENST00000589091 ACOT6Q3I5F7 207 aaPredicted RBP10.11□□□□□ -0.79
DNMT1-217ENST00000589091 Q8TAT8 98 aa10.11□□□□□ -0.79
DNMT1-217ENST00000589091 TMED6Q8WW62 240 aa10.11□□□□□ -0.79
DNMT1-217ENST00000589091 MBD2Q9UBB5 411 aa10.11□□□□□ -0.79
DNMT1-217ENST00000589091 PRO0255Q9UI72 69 aa10.11□□□□□ -0.79
DNMT1-217ENST00000589091 TP53TG3Q9ULZ0 132 aa10.11□□□□□ -0.79
DNMT1-217ENST00000589091 ICOSQ9Y6W8 199 aa10.11□□□□□ -0.79
DNMT1-217ENST00000589091 DIRC3C9JPN6 131 aa10.1□□□□□ -0.79
DNMT1-217ENST00000589091 PAX4O43316 350 aa10.1□□□□□ -0.79
DNMT1-217ENST00000589091 Q6AWC8 147 aa10.1□□□□□ -0.79
DNMT1-217ENST00000589091 PQLC2Q6ZP29 291 aa10.1□□□□□ -0.79
DNMT1-217ENST00000589091 ARL6IP6Q8N6S5 226 aa10.1□□□□□ -0.79
DNMT1-217ENST00000589091 SMIM3Q9BZL3 60 aa10.1□□□□□ -0.79
DNMT1-217ENST00000589091 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
DNMT1-217ENST00000589091 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
DNMT1-217ENST00000589091 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
DNMT1-217ENST00000589091 A0A1W2PPV4 95 aa10.09□□□□□ -0.79
DNMT1-217ENST00000589091 CMTM2Q8TAZ6 248 aa10.09□□□□□ -0.79
DNMT1-217ENST00000589091 SPXQ9BT56 116 aa10.09□□□□□ -0.79
DNMT1-217ENST00000589091 KRTAP1-5Q9BYS1 174 aa10.09□□□□□ -0.79
DNMT1-217ENST00000589091 SIVA1O15304 175 aa10.08□□□□□ -0.8
DNMT1-217ENST00000589091 MUC21Q5SSG8 566 aa10.08□□□□□ -0.8
DNMT1-217ENST00000589091 FAM159AQ6UWV7 190 aa10.08□□□□□ -0.8
DNMT1-217ENST00000589091 Q6ZQT7 251 aa10.08□□□□□ -0.8
DNMT1-217ENST00000589091 DNAH11Q96DT5 4516 aa10.08□□□□□ -0.8
DNMT1-217ENST00000589091 PGPA6NDG6 321 aa10.07□□□□□ -0.8
DNMT1-217ENST00000589091 CDK2AP2O75956 126 aa10.07□□□□□ -0.8
DNMT1-217ENST00000589091 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
DNMT1-217ENST00000589091 CRYBA4P53673 196 aa10.07□□□□□ -0.8
DNMT1-217ENST00000589091 MRPL23Q16540 153 aaKnown RBP10.07□□□□□ -0.8
DNMT1-217ENST00000589091 HHLA3Q9XRX5 114 aa10.07□□□□□ -0.8
DNMT1-217ENST00000589091 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
DNMT1-217ENST00000589091 TRGV4A0A0C4DH28 118 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 FHL2Q14192 279 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 TMEM183BQ1AE95 376 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 IQCF2Q8IXL9 164 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 TMEM183AQ8IXX5 376 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 OR10G4Q8NGN3 311 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 RASL10AQ92737 203 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 HYLS1Q96M11 299 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 WFDC1Q9HC57 220 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 BATF3Q9NR55 127 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 RPH3ALQ9UNE2 315 aa10.06□□□□□ -0.8
DNMT1-217ENST00000589091 RAB2AP61019 212 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 TDRG1Q3Y452 100 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 NEGR1Q7Z3B1 354 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 SPATA12Q7Z6I5 190 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 OR10G9Q8NGN4 311 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 OR10G7Q8NGN6 311 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 C8orf49Q96NF6 230 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 MDFICQ9P1T7 246 aa10.05□□□□□ -0.8
DNMT1-217ENST00000589091 TRAV21A0A0B4J279 112 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 SERTM2A0A1B0GWG4 89 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 NXPH4O95158 308 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 ORM1P02763 201 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 CDC34P49427 236 aaPredicted RBP10.04□□□□□ -0.8
DNMT1-217ENST00000589091 LINC00315P59091 139 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 OR2G3Q8NGZ4 309 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 PCNPQ8WW12 178 aaKnown RBP10.04□□□□□ -0.8
DNMT1-217ENST00000589091 ALG5Q9Y673 324 aa10.04□□□□□ -0.8
DNMT1-217ENST00000589091 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
DNMT1-217ENST00000589091 SRIP30626 198 aa10.03□□□□□ -0.8
DNMT1-217ENST00000589091 KCNS1Q96KK3 526 aa10.03□□□□□ -0.8
DNMT1-217ENST00000589091 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
DNMT1-217ENST00000589091 PSMG3Q9BT73 122 aaPredicted RBP10.03□□□□□ -0.8
DNMT1-217ENST00000589091 TREM1Q9NP99 234 aa10.03□□□□□ -0.8
DNMT1-217ENST00000589091 NAGKQ9UJ70 344 aa10.03□□□□□ -0.8
DNMT1-217ENST00000589091 K7EP13 123 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 K7EQM0 130 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 M0R2P5 195 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 EIF3GO75821 320 aaKnown RBP eCLIP10.02□□□□□ -0.81
DNMT1-217ENST00000589091 PTTG1O95997 202 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 MBP02144 154 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 SFTA3P0C7M3 94 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 ARL14EPLP0DKL9 152 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 ZNF479Q96JC4 524 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 SDF2L1Q9HCN8 221 aa10.02□□□□□ -0.81
DNMT1-217ENST00000589091 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
DNMT1-217ENST00000589091 C9JCJ5 164 aa10.01□□□□□ -0.81
DNMT1-217ENST00000589091 K7EQD1 137 aa10.01□□□□□ -0.81
DNMT1-217ENST00000589091 STAG3L2P0CL84 134 aa10.01□□□□□ -0.81
DNMT1-217ENST00000589091 STAG3L3P0CL85 134 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms