RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 SSX7Q7RTT5 188 aa13.34□□□□□ -0.27
CCDC130-209ENST00000588809 ARL6IP6Q8N6S5 226 aa13.34□□□□□ -0.27
CCDC130-209ENST00000588809 TMED6Q8WW62 240 aa13.34□□□□□ -0.27
CCDC130-209ENST00000588809 AQP10Q96PS8 301 aa13.34□□□□□ -0.27
CCDC130-209ENST00000588809 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
CCDC130-209ENST00000588809 TP53TG3Q9ULZ0 132 aa13.34□□□□□ -0.27
CCDC130-209ENST00000588809 TRGV2A0A075B6R0 118 aa13.33□□□□□ -0.28
CCDC130-209ENST00000588809 TRGV1A0A0A0MS02 117 aa13.33□□□□□ -0.28
CCDC130-209ENST00000588809 A0A0J9YY99 117 aa13.33□□□□□ -0.28
CCDC130-209ENST00000588809 RAB2AP61019 212 aa13.33□□□□□ -0.28
CCDC130-209ENST00000588809 OR2G3Q8NGZ4 309 aa13.33□□□□□ -0.28
CCDC130-209ENST00000588809 MED28Q9H204 178 aa13.33□□□□□ -0.28
CCDC130-209ENST00000588809 A0A1W2PPV4 95 aa13.32□□□□□ -0.28
CCDC130-209ENST00000588809 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC130-209ENST00000588809 Q6AWC8 147 aa13.32□□□□□ -0.28
CCDC130-209ENST00000588809 ASB13Q8WXK3 278 aa13.32□□□□□ -0.28
CCDC130-209ENST00000588809 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
CCDC130-209ENST00000588809 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
CCDC130-209ENST00000588809 FAM74A1Q5RGS3 127 aa13.31□□□□□ -0.28
CCDC130-209ENST00000588809 OR10G4Q8NGN3 311 aa13.31□□□□□ -0.28
CCDC130-209ENST00000588809 OR10G9Q8NGN4 311 aa13.31□□□□□ -0.28
CCDC130-209ENST00000588809 OR10G7Q8NGN6 311 aa13.31□□□□□ -0.28
CCDC130-209ENST00000588809 ST6GAL2Q96JF0 529 aa13.31□□□□□ -0.28
CCDC130-209ENST00000588809 PSMG3Q9BT73 122 aaPredicted RBP13.31□□□□□ -0.28
CCDC130-209ENST00000588809 PGPA6NDG6 321 aa13.3□□□□□ -0.28
CCDC130-209ENST00000588809 ZNF415Q09FC8 603 aa13.3□□□□□ -0.28
CCDC130-209ENST00000588809 HYLS1Q96M11 299 aa13.3□□□□□ -0.28
CCDC130-209ENST00000588809 ARPC5LQ9BPX5 153 aa13.3□□□□□ -0.28
CCDC130-209ENST00000588809 GIPP09681 153 aaPredicted RBP13.29□□□□□ -0.28
CCDC130-209ENST00000588809 ESRGQ1W209 222 aa13.29□□□□□ -0.28
CCDC130-209ENST00000588809 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
CCDC130-209ENST00000588809 Q9H8V8 135 aa13.29□□□□□ -0.28
CCDC130-209ENST00000588809 A0A096LPF7 62 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 STAG3L2P0CL84 134 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 STAG3L3P0CL85 134 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 ARL14EPLP0DKL9 152 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
CCDC130-209ENST00000588809 SERF2P84101 59 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 TDRG1Q3Y452 100 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 C6orf223Q8N319 242 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 HSD17B11Q8NBQ5 300 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 SUN5Q8TC36 379 aa13.28□□□□□ -0.28
CCDC130-209ENST00000588809 MRPL16Q9NX20 251 aaKnown RBP13.28□□□□□ -0.28
CCDC130-209ENST00000588809 MRPS16Q9Y3D3 137 aaKnown RBP13.28□□□□□ -0.28
CCDC130-209ENST00000588809 HMGB3O15347 200 aaKnown RBP13.27□□□□□ -0.29
CCDC130-209ENST00000588809 ATP6V0CP27449 155 aa13.27□□□□□ -0.29
CCDC130-209ENST00000588809 Q5BKY6 102 aa13.27□□□□□ -0.29
CCDC130-209ENST00000588809 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
CCDC130-209ENST00000588809 GOLT1AQ6ZVE7 132 aa13.27□□□□□ -0.29
CCDC130-209ENST00000588809 MBP02144 154 aa13.26□□□□□ -0.29
CCDC130-209ENST00000588809 FAM159AQ6UWV7 190 aa13.26□□□□□ -0.29
CCDC130-209ENST00000588809 MDFICQ9P1T7 246 aa13.26□□□□□ -0.29
CCDC130-209ENST00000588809 TRGV11A0A075B6L2 103 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 MED14OSP0DP75 135 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 TTC32Q5I0X7 151 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 RAB24Q969Q5 203 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 TVP23CQ96ET8 276 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 SPXQ9BT56 116 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 KRTAP1-5Q9BYS1 174 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 PRO0255Q9UI72 69 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 RPH3ALQ9UNE2 315 aa13.25□□□□□ -0.29
CCDC130-209ENST00000588809 PCLOQ9Y6V0 5065 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 SERTM2A0A1B0GWG4 89 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 A0A1W2PPQ1 181 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 RNF222A6NCQ9 220 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 TNP2Q05952 138 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 SLAQ13239 276 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 FHL2Q14192 279 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 TMEM183BQ1AE95 376 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 TMEM183AQ8IXX5 376 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 RASL10AQ92737 203 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 TNFSF18Q9UNG2 199 aa13.24□□□□□ -0.29
CCDC130-209ENST00000588809 PAX4O43316 350 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 GCHFRP30047 84 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 CRYBA4P53673 196 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 GNG5P63218 68 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 IQCF2Q8IXL9 164 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 INO80EQ8NBZ0 244 aaPredicted RBP13.23□□□□□ -0.29
CCDC130-209ENST00000588809 TREM1Q9NP99 234 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 HHLA3Q9XRX5 114 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 ICOSQ9Y6W8 199 aa13.23□□□□□ -0.29
CCDC130-209ENST00000588809 TRAV21A0A0B4J279 112 aa13.22□□□□□ -0.29
CCDC130-209ENST00000588809 IGHV3-53P01767 116 aa13.22□□□□□ -0.29
CCDC130-209ENST00000588809 CXorf1O96002 111 aa13.21□□□□□ -0.29
CCDC130-209ENST00000588809 TCRAP04437 139 aa13.21□□□□□ -0.29
CCDC130-209ENST00000588809 BTF3P20290 206 aaKnown RBP13.21□□□□□ -0.29
CCDC130-209ENST00000588809 TMEM167BQ9NRX6 74 aa13.21□□□□□ -0.29
CCDC130-209ENST00000588809 RYR1P21817 5038 aa13.21□□□□□ -0.3
CCDC130-209ENST00000588809 IGHV3-16A0A0C4DH30 117 aa13.2□□□□□ -0.3
CCDC130-209ENST00000588809 GGTLC3B5MD39 225 aa13.2□□□□□ -0.3
CCDC130-209ENST00000588809 F6UZH7 168 aa13.2□□□□□ -0.3
CCDC130-209ENST00000588809 G3V3Q6 166 aa13.2□□□□□ -0.3
CCDC130-209ENST00000588809 RPL7L1Q6DKI1 246 aaKnown RBP13.2□□□□□ -0.3
CCDC130-209ENST00000588809 OR2T35Q8NGX2 323 aa13.2□□□□□ -0.3
CCDC130-209ENST00000588809 ACTR3CQ9C0K3 210 aaPredicted RBP13.2□□□□□ -0.3
CCDC130-209ENST00000588809 NAGKQ9UJ70 344 aa13.2□□□□□ -0.3
CCDC130-209ENST00000588809 LRP1BQ9NZR2 4599 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms