RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 A0A087WWL8 130 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 TRAV1-1A0A0B4J248 108 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 A0A0J9YWU9 116 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 TMEM189A5PLL7 270 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 KLLNB2CW77 178 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 GGTLC3B5MD39 225 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 PRB4P10163 310 aaPredicted RBP5.79□□□□□ -1.48
SMAD4-204ENST00000586253 CRISP2P16562 243 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 SULT1A2P50226 295 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 ZNF138P52744 262 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 FGF8P55075 233 aaPredicted RBP5.79□□□□□ -1.48
SMAD4-204ENST00000586253 IQCF2Q8IXL9 164 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 C1orf158Q8N1D5 194 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 SFT2D1Q8WV19 159 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 VGLL1Q99990 258 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 ZNF492Q9P255 531 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 LENEPQ9Y5L5 61 aa5.79□□□□□ -1.48
SMAD4-204ENST00000586253 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 IGHV4-28A0A0C4DH34 117 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 FBLL1A6NHQ2 334 aaKnown RBP5.78□□□□□ -1.48
SMAD4-204ENST00000586253 FAM74A7A6NL05 159 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 C3orf84H3BNL1 204 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 H7BYZ3 331 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 K7EQM0 130 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 HBE1P02100 147 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 PPT1P50897 306 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 TAS2R60P59551 318 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 ERCC8Q13216 396 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 GFI1BQ5VTD9 330 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 MUC7Q8TAX7 377 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 TCEAL7Q9BRU2 100 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 TMEM208Q9BTX3 173 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 TMPRSS5Q9H3S3 457 aa5.78□□□□□ -1.48
SMAD4-204ENST00000586253 YTHDF2Q9Y5A9 579 aaKnown RBP5.78□□□□□ -1.48
SMAD4-204ENST00000586253 IGHV3OR16-12A0A075B7B8 117 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 C9orf118A6NHY6 69 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 B5MCH6 92 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 TEX46H3BTG2 121 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 TCRAP04437 139 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 RBMY1A1P0DJD3 496 aaKnown RBP5.77□□□□□ -1.49
SMAD4-204ENST00000586253 RBMY1CP0DJD4 496 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 NKX2-5P52952 324 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-204ENST00000586253 GNG5P63218 68 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 RBMY1FQ15415 496 aaKnown RBP5.77□□□□□ -1.49
SMAD4-204ENST00000586253 RRN3P1Q2M238 152 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 GOLT1AQ6ZVE7 132 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 CCDC28AQ8IWP9 274 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 ZFAND2AQ8N6M9 145 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 CYB561D1Q8N8Q1 229 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 TMEM75Q8N9X5 138 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 HIST1H2BAQ96A08 127 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 NIPSNAP3BQ9BS92 247 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 ATG101Q9BSB4 218 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 EPDR1Q9UM22 224 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 RPH3ALQ9UNE2 315 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 CSMD3Q7Z407 3707 aa5.77□□□□□ -1.49
SMAD4-204ENST00000586253 TEX48A0A1B0GUV7 120 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 LOC102723971A0A1B0GUV8 181 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 C7orf71A4D174 169 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 GPX1P07203 203 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 UBE2G2P60604 165 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 RNF151Q2KHN1 245 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 ZNF493Q6ZR52 646 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 Q8TAT8 98 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 LINC01587Q99440 93 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 PYGO2Q9BRQ0 406 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 LINC00467Q9BRT7 94 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 MANBALQ9NQG1 85 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 FAM30AQ9NZY2 134 aa5.76□□□□□ -1.49
SMAD4-204ENST00000586253 TRAV8-1A0A0A6YYK1 113 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 TRAV12-3A0A0B4J271 114 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 F6UZH7 168 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 PEX7O00628 323 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 DEFB4AO15263 64 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 ZNF324O75467 553 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-204ENST00000586253 IFNA7P01567 189 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 IGLV2-11P01706 119 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 BTN1A1Q13410 526 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 Q6AWC8 147 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 C11orf45Q8TAV5 145 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 TMEM263Q8WUH6 116 aaKnown RBP5.75□□□□□ -1.49
SMAD4-204ENST00000586253 C16orf74Q96GX8 76 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 TXNDC17Q9BRA2 123 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 NDFIP1Q9BT67 221 aa5.75□□□□□ -1.49
SMAD4-204ENST00000586253 A0A1B0GV50 99 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 ZNF705GA8MUZ8 300 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-204ENST00000586253 J3KRW8 73 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 PAGE4O60829 102 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 SPART-AS1P0CW21 52 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 RNASE4P34096 147 aaKnown RBP5.74□□□□□ -1.49
SMAD4-204ENST00000586253 TAGLN2P37802 199 aaKnown RBP5.74□□□□□ -1.49
SMAD4-204ENST00000586253 FLI1Q01543 452 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-204ENST00000586253 SAPCD1Q5SSQ6 148 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 CASC10Q5T4H9 136 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 PRR9Q5T870 116 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 CST9LP1Q5W188 147 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 ALKAL2Q6UX46 152 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 ZNF680Q8NEM1 530 aa5.74□□□□□ -1.49
SMAD4-204ENST00000586253 RNASE8Q8TDE3 154 aaKnown RBP5.74□□□□□ -1.49
SMAD4-204ENST00000586253 TREM1Q9NP99 234 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms