RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 SPINK4O60575 86 aa12.46□□□□□ -0.41
SRSF1-209ENST00000585096 EIF3GO75821 320 aaKnown RBP eCLIP12.46□□□□□ -0.41
SRSF1-209ENST00000585096 SSX7Q7RTT5 188 aa12.46□□□□□ -0.41
SRSF1-209ENST00000585096 AQP10Q96PS8 301 aa12.46□□□□□ -0.41
SRSF1-209ENST00000585096 KLF12Q9Y4X4 402 aa12.46□□□□□ -0.41
SRSF1-209ENST00000585096 A0A1B0GVY2 172 aa12.45□□□□□ -0.42
SRSF1-209ENST00000585096 ARL6IP6Q8N6S5 226 aa12.45□□□□□ -0.42
SRSF1-209ENST00000585096 HSD17B11Q8NBQ5 300 aa12.45□□□□□ -0.42
SRSF1-209ENST00000585096 OR2G3Q8NGZ4 309 aa12.45□□□□□ -0.42
SRSF1-209ENST00000585096 TMED6Q8WW62 240 aa12.45□□□□□ -0.42
SRSF1-209ENST00000585096 TP53TG3Q9ULZ0 132 aa12.45□□□□□ -0.42
SRSF1-209ENST00000585096 NBDYA0A0U1RRE5 68 aa12.44□□□□□ -0.42
SRSF1-209ENST00000585096 GIPP09681 153 aaPredicted RBP12.44□□□□□ -0.42
SRSF1-209ENST00000585096 ZNF415Q09FC8 603 aa12.44□□□□□ -0.42
SRSF1-209ENST00000585096 Q6ZQT7 251 aa12.44□□□□□ -0.42
SRSF1-209ENST00000585096 PSMG3Q9BT73 122 aaPredicted RBP12.44□□□□□ -0.42
SRSF1-209ENST00000585096 FAT2Q9NYQ8 4349 aa12.43□□□□□ -0.42
SRSF1-209ENST00000585096 MBP02144 154 aa12.43□□□□□ -0.42
SRSF1-209ENST00000585096 CDC34P49427 236 aaPredicted RBP12.43□□□□□ -0.42
SRSF1-209ENST00000585096 INO80EQ8NBZ0 244 aaPredicted RBP12.43□□□□□ -0.42
SRSF1-209ENST00000585096 RPH3ALQ9UNE2 315 aa12.43□□□□□ -0.42
SRSF1-209ENST00000585096 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
SRSF1-209ENST00000585096 SERF2P84101 59 aa12.42□□□□□ -0.42
SRSF1-209ENST00000585096 MUC21Q5SSG8 566 aa12.42□□□□□ -0.42
SRSF1-209ENST00000585096 Q6AWC8 147 aa12.42□□□□□ -0.42
SRSF1-209ENST00000585096 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
SRSF1-209ENST00000585096 ST6GAL2Q96JF0 529 aa12.42□□□□□ -0.42
SRSF1-209ENST00000585096 DNAH17Q9UFH2 4485 aa12.42□□□□□ -0.42
SRSF1-209ENST00000585096 STAG3L2P0CL84 134 aa12.41□□□□□ -0.42
SRSF1-209ENST00000585096 STAG3L3P0CL85 134 aa12.41□□□□□ -0.42
SRSF1-209ENST00000585096 ARL14EPLP0DKL9 152 aa12.41□□□□□ -0.42
SRSF1-209ENST00000585096 ATP6V0CP27449 155 aa12.41□□□□□ -0.42
SRSF1-209ENST00000585096 GOLT1AQ6ZVE7 132 aa12.41□□□□□ -0.42
SRSF1-209ENST00000585096 Q9H8V8 135 aa12.41□□□□□ -0.42
SRSF1-209ENST00000585096 MRPL16Q9NX20 251 aaKnown RBP12.41□□□□□ -0.42
SRSF1-209ENST00000585096 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
SRSF1-209ENST00000585096 SLAQ13239 276 aa12.4□□□□□ -0.42
SRSF1-209ENST00000585096 ESRGQ1W209 222 aa12.4□□□□□ -0.42
SRSF1-209ENST00000585096 Q5BKY6 102 aa12.4□□□□□ -0.42
SRSF1-209ENST00000585096 RAB24Q969Q5 203 aa12.4□□□□□ -0.42
SRSF1-209ENST00000585096 VSIG2Q96IQ7 327 aa12.4□□□□□ -0.42
SRSF1-209ENST00000585096 SERTM2A0A1B0GWG4 89 aa12.39□□□□□ -0.43
SRSF1-209ENST00000585096 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
SRSF1-209ENST00000585096 C6orf223Q8N319 242 aa12.39□□□□□ -0.43
SRSF1-209ENST00000585096 SPXQ9BT56 116 aa12.39□□□□□ -0.43
SRSF1-209ENST00000585096 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
SRSF1-209ENST00000585096 ACTR3CQ9C0K3 210 aaPredicted RBP12.39□□□□□ -0.43
SRSF1-209ENST00000585096 TNFSF18Q9UNG2 199 aa12.39□□□□□ -0.43
SRSF1-209ENST00000585096 FXYD6-FXYD2A0A087WZ82 144 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 BORCS7-ASMTA0A0B4J1R7 106 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 PAX4O43316 350 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 TMEM183BQ1AE95 376 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 RGS21Q2M5E4 152 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 TMEM183AQ8IXX5 376 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 TMEM167BQ9NRX6 74 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 PRO0255Q9UI72 69 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 NAGKQ9UJ70 344 aa12.38□□□□□ -0.43
SRSF1-209ENST00000585096 MRPS16Q9Y3D3 137 aaKnown RBP12.38□□□□□ -0.43
SRSF1-209ENST00000585096 A0A096LPF7 62 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 TRAV21A0A0B4J279 112 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 K7EQM0 130 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 GCHFRP30047 84 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 GNG5P63218 68 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 TDRG1Q3Y452 100 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 C5orf17Q8NAS9 161 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 OR2T35Q8NGX2 323 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 SUN5Q8TC36 379 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 NDFIP1Q9BT67 221 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 SH3BGRL3Q9H299 93 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 ICOSQ9Y6W8 199 aa12.37□□□□□ -0.43
SRSF1-209ENST00000585096 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
SRSF1-209ENST00000585096 CXorf1O96002 111 aa12.36□□□□□ -0.43
SRSF1-209ENST00000585096 RPL7L1Q6DKI1 246 aaKnown RBP12.36□□□□□ -0.43
SRSF1-209ENST00000585096 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
SRSF1-209ENST00000585096 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
SRSF1-209ENST00000585096 HERC2O95714 4834 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 A0A1W2PPQ1 181 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 RNF222A6NCQ9 220 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 F6UZH7 168 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 TCRAP04437 139 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 RASL10AQ92737 203 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 TVP23CQ96ET8 276 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 KCNS1Q96KK3 526 aa12.35□□□□□ -0.43
SRSF1-209ENST00000585096 TRGV4A0A0C4DH28 118 aa12.34□□□□□ -0.43
SRSF1-209ENST00000585096 CRYBA4P53673 196 aa12.34□□□□□ -0.43
SRSF1-209ENST00000585096 FHL2Q14192 279 aa12.34□□□□□ -0.43
SRSF1-209ENST00000585096 C8orf49Q96NF6 230 aa12.34□□□□□ -0.43
SRSF1-209ENST00000585096 SDF2L1Q9HCN8 221 aa12.34□□□□□ -0.43
SRSF1-209ENST00000585096 GNRH2O43555 120 aa12.33□□□□□ -0.44
SRSF1-209ENST00000585096 MED14OSP0DP75 135 aa12.33□□□□□ -0.44
SRSF1-209ENST00000585096 SUMO1P63165 101 aaKnown RBP12.33□□□□□ -0.44
SRSF1-209ENST00000585096 MRPL23Q16540 153 aaKnown RBP12.33□□□□□ -0.44
SRSF1-209ENST00000585096 IQCF2Q8IXL9 164 aa12.33□□□□□ -0.44
SRSF1-209ENST00000585096 SGK494Q96LW2 274 aa12.33□□□□□ -0.44
SRSF1-209ENST00000585096 EPDR1Q9UM22 224 aa12.33□□□□□ -0.44
SRSF1-209ENST00000585096 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
SRSF1-209ENST00000585096 FBLL1A6NHQ2 334 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms